Analysis of interatomic Contacts of Structural Units in PDB entry:
9IYW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IYW entry

There is 1 chain in PDB entry 9IYW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 25ASN 927
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 9IYW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 53Right-handed alpha
Helix 2
AA2
A
97 101Right-handed 310
Helix 3
AA3
A
103 110Right-handed alpha
Helix 4
AA4
A
111 128Right-handed alpha
Helix 5
AA5
A
131 136Right-handed 310
Helix 6
AA6
A
149 157Right-handed alpha
Helix 7
AA7
A
166 171Right-handed alpha
Helix 8
AA8
A
174 185Right-handed alpha
Helix 9
AA9
A
195 197Right-handed 310
Helix 10
AB1
A
198 213Right-handed alpha
Helix 11
AB2
A
229 240Right-handed alpha
Helix 12
AB3
A
272 278Right-handed alpha
Helix 13
AB4
A
304 319Right-handed alpha
Helix 14
AB5
A
338 351Right-handed alpha
Helix 15
AB6
A
364 369Right-handed alpha
Helix 16
AB7
A
371 373Right-handed 310
Helix 17
AB8
A
374 390Right-handed alpha
Helix 18
AB9
A
406 411Right-handed alpha
Helix 19
AC1
A
484 500Right-handed alpha
Helix 20
AC2
A
501 507Right-handed alpha
Helix 21
AC3
A
508 519Right-handed alpha
Helix 22
AC4
A
533 546Right-handed alpha
Helix 23
AC5
A
577 584Right-handed alpha
Helix 24
AC6
A
584 605Right-handed alpha
Helix 25
AC7
A
614 621Right-handed alpha
Helix 26
AC8
A
625 631Right-handed alpha
Helix 27
AC9
A
633 655Right-handed alpha
Helix 28
AD1
A
667 676Right-handed alpha
Helix 29
AD2
A
680 697Right-handed alpha
Helix 30
AD3
A
710 720Right-handed alpha
Helix 31
AD4
A
743 756Right-handed alpha
Helix 32
AD5
A
771 776Right-handed 310
Helix 33
AD6
A
777 787Right-handed alpha
Helix 34
AD7
A
809 812Right-handed 310
Helix 35
AD8
A
813 823Right-handed alpha
Helix 36
AD9
A
826 837Right-handed alpha
Helix 37
AE1
A
849 858Right-handed alpha
Helix 38
AE2
A
878 893Right-handed alpha
Helix 39
AE3
A
898 903Right-handed alpha
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There are 8 sheets in PDB entry 9IYW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 193first strand
Strand 2
A
140 145parallel
Strand 3
A
218 225parallel
Strand 4
A
263 271anti-parallel
Strand 5
A
29 37anti-parallel
Strand 6
A
284 293anti-parallel
Strand 7
A
443 450anti-parallel
Strand 8
A
432 438anti-parallel
Strand 9
A
328 330parallel
Strand 10
A
359 362parallel
Strand 11
A
412 414parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
85 87anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
921 922anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 392first strand
Strand 2
A
419 420anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 482first strand
Strand 2
A
525 531anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
661 664first strand
Strand 2
A
562 566parallel
Strand 3
A
841 845parallel
Strand 4
A
868 870parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
726 733first strand
Strand 2
A
736 742anti-parallel
Strand 3
A
702 707anti-parallel
Strand 4
A
760 762anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
798 799first strand
Strand 2
A
804 805anti-parallel
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