Analysis of interatomic Contacts of Structural Units in PDB entry:
9IZ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9IZ5 entry

There are 4 chains in PDB entry 9IZ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 201
A
 TYR 203GLU 384
B
 MET 1THR 201
B
 TYR 203ALA 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 9IZ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 9Right-handed alpha
Helix 2
AA2
A
15 19Right-handed 310
Helix 3
AA3
A
34 42Right-handed alpha
Helix 4
AA4
A
56 70Right-handed alpha
Helix 5
AA5
A
80 93Right-handed alpha
Helix 6
AA6
A
106 120Right-handed alpha
Helix 7
AA7
A
130 137Right-handed alpha
Helix 8
AA8
A
159 171Right-handed alpha
Helix 9
AA9
A
181 186Right-handed alpha
Helix 10
AB1
A
187 192Right-handed 310
Helix 11
AB2
A
218 228Right-handed alpha
Helix 12
AB3
A
228 234Right-handed alpha
Helix 13
AB4
A
238 250Right-handed alpha
Helix 14
AB5
A
251 272Right-handed alpha
Helix 15
AB6
A
289 295Right-handed alpha
Helix 16
AB7
A
312 323Right-handed alpha
Helix 17
AB8
A
343 345Right-handed 310
Helix 18
AB9
A
349 353Right-handed 310
Helix 19
AC1
A
364 378Right-handed alpha
Helix 20
AC2
B
2 9Right-handed alpha
Helix 21
AC3
B
15 19Right-handed 310
Helix 22
AC4
B
34 42Right-handed alpha
Helix 23
AC5
B
56 70Right-handed alpha
Helix 24
AC6
B
80 93Right-handed alpha
Helix 25
AC7
B
106 120Right-handed alpha
Helix 26
AC8
B
130 137Right-handed alpha
Helix 27
AC9
B
159 171Right-handed alpha
Helix 28
AD1
B
181 186Right-handed alpha
Helix 29
AD2
B
187 192Right-handed 310
Helix 30
AD3
B
218 228Right-handed alpha
Helix 31
AD4
B
228 234Right-handed alpha
Helix 32
AD5
B
238 250Right-handed alpha
Helix 33
AD6
B
251 272Right-handed alpha
Helix 34
AD7
B
289 297Right-handed alpha
Helix 35
AD8
B
312 322Right-handed alpha
Helix 36
AD9
B
343 345Right-handed 310
Helix 37
AE1
B
349 353Right-handed 310
Helix 38
AE2
B
364 378Right-handed alpha
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There are 4 sheets in PDB entry 9IZ5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 78first strand
Strand 2
A
213 217anti-parallel
Strand 3
A
195 199anti-parallel
Strand 4
A
173 177parallel
Strand 5
A
142 148parallel
Strand 6
A
98 102parallel
Strand 7
A
123 127parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 280first strand
Strand 2
A
303 308anti-parallel
Strand 3
A
355 359anti-parallel
Strand 4
A
338 341anti-parallel
Strand 5
A
327 328parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 78first strand
Strand 2
B
213 217anti-parallel
Strand 3
B
195 199anti-parallel
Strand 4
B
173 177parallel
Strand 5
B
142 148parallel
Strand 6
B
98 102parallel
Strand 7
B
123 127parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
276 280first strand
Strand 2
B
303 308anti-parallel
Strand 3
B
355 359anti-parallel
Strand 4
B
338 341anti-parallel
Strand 5
B
327 328parallel
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