Analysis of interatomic Contacts of Structural Units in PDB entry:
9J06


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J06 entry

There is 1 chain in PDB entry 9J06 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2SER 521
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 9J06. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 11Right-handed alpha
Helix 2
AA2
A
14 26Right-handed alpha
Helix 3
AA3
A
27 29Right-handed 310
Helix 4
AA4
A
30 36Right-handed alpha
Helix 5
AA5
A
119 125Right-handed alpha
Helix 6
AA6
A
131 155Right-handed alpha
Helix 7
AA7
A
155 160Right-handed alpha
Helix 8
AA8
A
160 178Right-handed alpha
Helix 9
AA9
A
179 182Right-handed 310
Helix 10
AB1
A
184 214Right-handed alpha
Helix 11
AB2
A
215 217Right-handed 310
Helix 12
AB3
A
218 232Right-handed alpha
Helix 13
AB4
A
232 244Right-handed alpha
Helix 14
AB5
A
246 256Right-handed alpha
Helix 15
AB6
A
256 264Right-handed alpha
Helix 16
AB7
A
271 279Right-handed alpha
Helix 17
AB8
A
280 296Right-handed alpha
Helix 18
AB9
A
297 304Right-handed alpha
Helix 19
AC1
A
305 313Right-handed alpha
Helix 20
AC2
A
325 330Right-handed 310
Helix 21
AC3
A
332 357Right-handed alpha
Helix 22
AC4
A
366 376Right-handed alpha
Helix 23
AC5
A
377 392Right-handed alpha
Helix 24
AC6
A
393 412Right-handed alpha
Helix 25
AC7
A
421 449Right-handed alpha
Helix 26
AC8
A
453 477Right-handed alpha
Helix 27
AC9
A
478 481Right-handed 310
Helix 28
AD1
A
484 499Right-handed alpha
Helix 29
AD2
A
500 504Right-handed 310
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There is 1 sheet (AA1) in PDB entry 9J06.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
109 111anti-parallel
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