Analysis of interatomic Contacts of Structural Units in PDB entry:
9J0A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J0A entry

There are 6 chains in PDB entry 9J0A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 83LEU 1048
B
 LYS 321THR 394
C
 ASP 224LYS 247
D
 MET 82ASP 1054
E
 LYS 321THR 394
F
 ASP 224LYS 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are116 helices in PDB entry 9J0A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
83 91Right-handed alpha
Helix 2
AA2
A
94 109Right-handed alpha
Helix 3
AA3
A
109 125Right-handed alpha
Helix 4
AA4
A
132 138Right-handed alpha
Helix 5
AA5
A
140 151Right-handed alpha
Helix 6
AA6
A
165 187Right-handed alpha
Helix 7
AA7
A
189 194Right-handed 310
Helix 8
AA8
A
195 209Right-handed alpha
Helix 9
AA9
A
212 254Right-handed alpha
Helix 10
AB1
A
262 292Right-handed alpha
Helix 11
AB2
A
292 297Right-handed alpha
Helix 12
AB3
A
301 319Right-handed alpha
Helix 13
AB4
A
319 324Right-handed alpha
Helix 14
AB5
A
325 336Right-handed alpha
Helix 15
AB6
A
340 357Right-handed alpha
Helix 16
AB7
A
363 379Right-handed alpha
Helix 17
AB8
A
383 401Right-handed alpha
Helix 18
AB9
A
402 405Right-handed 310
Helix 19
AC1
A
406 416Right-handed alpha
Helix 20
AC2
A
417 419Right-handed 310
Helix 21
AC3
A
421 436Right-handed alpha
Helix 22
AC4
A
457 471Right-handed alpha
Helix 23
AC5
A
477 485Right-handed alpha
Helix 24
AC6
A
488 493Right-handed alpha
Helix 25
AC7
A
494 503Right-handed alpha
Helix 26
AC8
A
514 534Right-handed alpha
Helix 27
AC9
A
549 578Right-handed alpha
Helix 28
AD1
A
581 590Right-handed alpha
Helix 29
AD2
A
591 595Right-handed 310
Helix 30
AD3
A
596 603Right-handed alpha
Helix 31
AD4
A
605 623Right-handed alpha
Helix 32
AD5
A
625 640Right-handed alpha
Helix 33
AD6
A
646 673Right-handed alpha
Helix 34
AD7
A
680 701Right-handed alpha
Helix 35
AD8
A
703 707Right-handed 310
Helix 36
AD9
A
708 723Right-handed alpha
Helix 37
AE1
A
726 748Right-handed alpha
Helix 38
AE2
A
755 777Right-handed alpha
Helix 39
AE3
A
780 798Right-handed alpha
Helix 40
AE4
A
799 804Right-handed 310
Helix 41
AE5
A
807 811Right-handed 310
Helix 42
AE6
A
818 833Right-handed alpha
Helix 43
AE7
A
851 874Right-handed alpha
Helix 44
AE8
A
878 880Right-handed 310
Helix 45
AE9
A
881 888Right-handed alpha
Helix 46
AF1
A
892 911Right-handed alpha
Helix 47
AF2
A
911 934Right-handed alpha
Helix 48
AF3
A
942 958Right-handed alpha
Helix 49
AF4
A
965 982Right-handed alpha
Helix 50
AF5
A
998 1005Right-handed alpha
Helix 51
AF6
A
1011 1027Right-handed alpha
Helix 52
AF7
A
1028 1033Right-handed alpha
Helix 53
AF8
A
1038 1048Right-handed alpha
Helix 54
AF9
B
333 343Right-handed alpha
Helix 55
AG1
B
344 348Right-handed 310
Helix 56
AG2
B
357 367Right-handed alpha
Helix 57
AG3
B
368 373Right-handed alpha
Helix 58
AG4
B
382 393Right-handed alpha
Helix 59
AG5
D
83 91Right-handed alpha
Helix 60
AG6
D
94 109Right-handed alpha
Helix 61
AG7
D
109 125Right-handed alpha
Helix 62
AG8
D
132 138Right-handed alpha
Helix 63
AG9
D
140 151Right-handed alpha
Helix 64
AH1
D
165 187Right-handed alpha
Helix 65
AH2
D
189 193Right-handed 310
Helix 66
AH3
D
195 210Right-handed alpha
Helix 67
AH4
D
212 254Right-handed alpha
Helix 68
AH5
D
261 292Right-handed alpha
Helix 69
AH6
D
292 297Right-handed alpha
Helix 70
AH7
D
301 319Right-handed alpha
Helix 71
AH8
D
319 324Right-handed alpha
Helix 72
AH9
D
325 336Right-handed alpha
Helix 73
AI1
D
340 356Right-handed alpha
Helix 74
AI2
D
361 379Right-handed alpha
Helix 75
AI3
D
383 402Right-handed alpha
Helix 76
AI4
D
405 416Right-handed alpha
Helix 77
AI5
D
417 419Right-handed 310
Helix 78
AI6
D
421 436Right-handed alpha
Helix 79
AI7
D
457 471Right-handed alpha
Helix 80
AI8
D
477 486Right-handed alpha
Helix 81
AI9
D
488 493Right-handed alpha
Helix 82
AJ1
D
494 503Right-handed alpha
Helix 83
AJ2
D
514 534Right-handed alpha
Helix 84
AJ3
D
549 578Right-handed alpha
Helix 85
AJ4
D
581 590Right-handed alpha
Helix 86
AJ5
D
591 596Right-handed 310
Helix 87
AJ6
D
597 603Right-handed alpha
Helix 88
AJ7
D
605 623Right-handed alpha
Helix 89
AJ8
D
625 640Right-handed alpha
Helix 90
AJ9
D
646 673Right-handed alpha
Helix 91
AK1
D
680 701Right-handed alpha
Helix 92
AK2
D
703 707Right-handed 310
Helix 93
AK3
D
708 723Right-handed alpha
Helix 94
AK4
D
726 749Right-handed alpha
Helix 95
AK5
D
756 777Right-handed alpha
Helix 96
AK6
D
780 798Right-handed alpha
Helix 97
AK7
D
799 804Right-handed 310
Helix 98
AK8
D
807 811Right-handed 310
Helix 99
AK9
D
818 833Right-handed alpha
Helix 100
AL1
D
852 874Right-handed alpha
Helix 101
AL2
D
878 880Right-handed 310
Helix 102
AL3
D
881 888Right-handed alpha
Helix 103
AL4
D
892 911Right-handed alpha
Helix 104
AL5
D
911 934Right-handed alpha
Helix 105
AL6
D
942 960Right-handed alpha
Helix 106
AL7
D
966 982Right-handed alpha
Helix 107
AL8
D
998 1004Right-handed alpha
Helix 108
AL9
D
1005 1007Right-handed 310
Helix 109
AM1
D
1011 1025Right-handed alpha
Helix 110
AM2
D
1027 1033Right-handed alpha
Helix 111
AM3
D
1038 1048Right-handed alpha
Helix 112
AM4
E
333 343Right-handed alpha
Helix 113
AM5
E
344 348Right-handed 310
Helix 114
AM6
E
357 367Right-handed alpha
Helix 115
AM7
E
368 373Right-handed alpha
Helix 116
AM8
E
382 393Right-handed alpha
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There are no sheets in PDB entry 9J0A
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