Analysis of interatomic Contacts of Structural Units in PDB entry:
9J3V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J3V entry

There are 6 chains in PDB entry 9J3V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 28HIS 294
B
 LEU 26HIS 294
C
 LEU 28ASP 292
D
 LEU 28ASP 292
E
 LEU 28HIS 294
F
 LEU 26ARG 61
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 9J3V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 47Right-handed alpha
Helix 2
AA2
A
54 63Right-handed alpha
Helix 3
AA3
A
67 103Right-handed alpha
Helix 4
AA4
A
107 127Right-handed alpha
Helix 5
AA5
A
129 134Right-handed alpha
Helix 6
AA6
A
138 142Right-handed 310
Helix 7
AA7
A
143 152Right-handed alpha
Helix 8
AA8
A
152 158Right-handed alpha
Helix 9
AA9
A
161 169Right-handed alpha
Helix 10
AB1
A
172 186Right-handed alpha
Helix 11
AB2
A
190 216Right-handed alpha
Helix 12
AB3
A
231 250Right-handed alpha
Helix 13
AB4
A
254 259Right-handed 310
Helix 14
AB5
A
261 293Right-handed alpha
Helix 15
AB6
B
29 47Right-handed alpha
Helix 16
AB7
B
54 63Right-handed alpha
Helix 17
AB8
B
67 103Right-handed alpha
Helix 18
AB9
B
107 127Right-handed alpha
Helix 19
AC1
B
129 136Right-handed alpha
Helix 20
AC2
B
138 142Right-handed 310
Helix 21
AC3
B
143 152Right-handed alpha
Helix 22
AC4
B
152 158Right-handed alpha
Helix 23
AC5
B
161 169Right-handed alpha
Helix 24
AC6
B
172 186Right-handed alpha
Helix 25
AC7
B
190 216Right-handed alpha
Helix 26
AC8
B
231 249Right-handed alpha
Helix 27
AC9
B
254 259Right-handed 310
Helix 28
AD1
B
261 293Right-handed alpha
Helix 29
AD2
C
31 47Right-handed alpha
Helix 30
AD3
C
54 61Right-handed alpha
Helix 31
AD4
C
67 102Right-handed alpha
Helix 32
AD5
C
107 127Right-handed alpha
Helix 33
AD6
C
129 136Right-handed alpha
Helix 34
AD7
C
138 142Right-handed 310
Helix 35
AD8
C
143 152Right-handed alpha
Helix 36
AD9
C
153 158Right-handed alpha
Helix 37
AE1
C
161 170Right-handed alpha
Helix 38
AE2
C
172 186Right-handed alpha
Helix 39
AE3
C
190 216Right-handed alpha
Helix 40
AE4
C
231 249Right-handed alpha
Helix 41
AE5
C
254 259Right-handed 310
Helix 42
AE6
C
261 292Right-handed alpha
Helix 43
AE7
D
31 47Right-handed alpha
Helix 44
AE8
D
55 63Right-handed alpha
Helix 45
AE9
D
67 103Right-handed alpha
Helix 46
AF1
D
107 127Right-handed alpha
Helix 47
AF2
D
129 136Right-handed alpha
Helix 48
AF3
D
138 142Right-handed 310
Helix 49
AF4
D
143 152Right-handed alpha
Helix 50
AF5
D
152 158Right-handed alpha
Helix 51
AF6
D
161 169Right-handed alpha
Helix 52
AF7
D
172 186Right-handed alpha
Helix 53
AF8
D
190 214Right-handed alpha
Helix 54
AF9
D
227 230Right-handed 310
Helix 55
AG1
D
231 250Right-handed alpha
Helix 56
AG2
D
254 259Right-handed 310
Helix 57
AG3
D
261 292Right-handed alpha
Helix 58
AG4
E
29 47Right-handed alpha
Helix 59
AG5
E
55 63Right-handed alpha
Helix 60
AG6
E
67 103Right-handed alpha
Helix 61
AG7
E
107 127Right-handed alpha
Helix 62
AG8
E
129 134Right-handed alpha
Helix 63
AG9
E
138 142Right-handed 310
Helix 64
AH1
E
143 152Right-handed alpha
Helix 65
AH2
E
152 158Right-handed alpha
Helix 66
AH3
E
161 169Right-handed alpha
Helix 67
AH4
E
172 186Right-handed alpha
Helix 68
AH5
E
190 215Right-handed alpha
Helix 69
AH6
E
231 250Right-handed alpha
Helix 70
AH7
E
254 259Right-handed 310
Helix 71
AH8
E
262 293Right-handed alpha
Helix 72
AH9
F
29 47Right-handed alpha
Helix 73
AI1
F
55 63Right-handed alpha
Helix 74
AI2
F
67 103Right-handed alpha
Helix 75
AI3
F
107 127Right-handed alpha
Helix 76
AI4
F
129 134Right-handed alpha
Helix 77
AI5
F
138 142Right-handed 310
Helix 78
AI6
F
143 152Right-handed alpha
Helix 79
AI7
F
152 158Right-handed alpha
Helix 80
AI8
F
161 169Right-handed alpha
Helix 81
AI9
F
172 186Right-handed alpha
Helix 82
AJ1
F
190 216Right-handed alpha
Helix 83
AJ2
F
232 250Right-handed alpha
Helix 84
AJ3
F
254 259Right-handed 310
Helix 85
AJ4
F
262 292Right-handed alpha
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There are no sheets in PDB entry 9J3V
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