Analysis of interatomic Contacts of Structural Units in PDB entry:
9J40


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J40 entry

There are 2 chains in PDB entry 9J40 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 36ILE 718
A
 SER 36ILE 718
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 9J40. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
38 41Right-handed 310
Helix 2
AA2
B
42 62Right-handed alpha
Helix 3
AA3
B
66 80Right-handed alpha
Helix 4
AA4
B
80 93Right-handed alpha
Helix 5
AA5
B
99 125Right-handed alpha
Helix 6
AA6
B
130 141Right-handed alpha
Helix 7
AA7
B
149 159Right-handed alpha
Helix 8
AA8
B
162 167Right-handed 310
Helix 9
AA9
B
168 196Right-handed alpha
Helix 10
AB1
B
202 216Right-handed alpha
Helix 11
AB2
B
219 233Right-handed alpha
Helix 12
AB3
B
238 251Right-handed alpha
Helix 13
AB4
B
251 264Right-handed alpha
Helix 14
AB5
B
272 288Right-handed alpha
Helix 15
AB6
B
288 302Right-handed alpha
Helix 16
AB7
B
306 322Right-handed alpha
Helix 17
AB8
B
327 337Right-handed alpha
Helix 18
AB9
B
339 366Right-handed alpha
Helix 19
AC1
B
372 404Right-handed alpha
Helix 20
AC2
B
405 408Right-handed 310
Helix 21
AC3
B
409 436Right-handed alpha
Helix 22
AC4
B
439 473Right-handed alpha
Helix 23
AC5
B
480 502Right-handed alpha
Helix 24
AC6
B
511 515Right-handed 310
Helix 25
AC7
B
517 545Right-handed alpha
Helix 26
AC8
B
655 682Right-handed alpha
Helix 27
AC9
B
688 702Right-handed alpha
Helix 28
AD1
B
702 712Right-handed alpha
Helix 29
AD2
A
38 41Right-handed 310
Helix 30
AD3
A
42 62Right-handed alpha
Helix 31
AD4
A
66 93Right-handed alpha
Helix 32
AD5
A
99 125Right-handed alpha
Helix 33
AD6
A
130 141Right-handed alpha
Helix 34
AD7
A
149 159Right-handed alpha
Helix 35
AD8
A
162 167Right-handed 310
Helix 36
AD9
A
168 196Right-handed alpha
Helix 37
AE1
A
202 216Right-handed alpha
Helix 38
AE2
A
219 233Right-handed alpha
Helix 39
AE3
A
238 251Right-handed alpha
Helix 40
AE4
A
251 264Right-handed alpha
Helix 41
AE5
A
272 302Right-handed alpha
Helix 42
AE6
A
306 322Right-handed alpha
Helix 43
AE7
A
327 337Right-handed alpha
Helix 44
AE8
A
339 366Right-handed alpha
Helix 45
AE9
A
371 404Right-handed alpha
Helix 46
AF1
A
405 408Right-handed 310
Helix 47
AF2
A
409 434Right-handed alpha
Helix 48
AF3
A
439 473Right-handed alpha
Helix 49
AF4
A
480 502Right-handed alpha
Helix 50
AF5
A
511 515Right-handed 310
Helix 51
AF6
A
517 545Right-handed alpha
Helix 52
AF7
A
655 682Right-handed alpha
Helix 53
AF8
A
688 702Right-handed alpha
Helix 54
AF9
A
702 712Right-handed alpha
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There are no sheets in PDB entry 9J40
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