Analysis of interatomic Contacts of Structural Units in PDB entry:
9J67


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J67 entry

There are 2 chains in PDB entry 9J67 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 24ALA 311
B
 ILE 24ALA 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9J67. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 46Right-handed alpha
Helix 2
AA2
A
60 66Right-handed alpha
Helix 3
AA3
A
73 81Right-handed alpha
Helix 4
AA4
A
90 99Right-handed alpha
Helix 5
AA5
A
101 106Right-handed alpha
Helix 6
AA6
A
117 131Right-handed alpha
Helix 7
AA7
A
143 147Right-handed 310
Helix 8
AA8
A
159 166Right-handed alpha
Helix 9
AA9
A
166 174Right-handed alpha
Helix 10
AB1
A
185 215Right-handed alpha
Helix 11
AB2
A
218 247Right-handed alpha
Helix 12
AB3
A
255 273Right-handed alpha
Helix 13
AB4
A
277 293Right-handed alpha
Helix 14
AB5
A
299 301Right-handed 310
Helix 15
AB6
A
302 309Right-handed alpha
Helix 16
AB7
B
33 47Right-handed alpha
Helix 17
AB8
B
61 66Right-handed alpha
Helix 18
AB9
B
73 80Right-handed alpha
Helix 19
AC1
B
90 99Right-handed alpha
Helix 20
AC2
B
101 106Right-handed alpha
Helix 21
AC3
B
117 131Right-handed alpha
Helix 22
AC4
B
143 147Right-handed 310
Helix 23
AC5
B
159 166Right-handed alpha
Helix 24
AC6
B
166 174Right-handed alpha
Helix 25
AC7
B
185 215Right-handed alpha
Helix 26
AC8
B
218 247Right-handed alpha
Helix 27
AC9
B
255 273Right-handed alpha
Helix 28
AD1
B
277 293Right-handed alpha
Helix 29
AD2
B
299 302Right-handed 310
Helix 30
AD3
B
303 309Right-handed alpha
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There are 2 sheets in PDB entry 9J67. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
50 53parallel
Strand 3
A
27 30parallel
Strand 4
A
83 86parallel
Strand 5
A
109 113parallel
Strand 6
A
134 140parallel
Strand 7
A
154 158anti-parallel
Strand 8
A
178 179parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 70first strand
Strand 2
B
50 53parallel
Strand 3
B
27 30parallel
Strand 4
B
83 86parallel
Strand 5
B
109 112parallel
Strand 6
B
134 140parallel
Strand 7
B
154 158anti-parallel
Strand 8
B
178 181parallel
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