Analysis of interatomic Contacts of Structural Units in PDB entry:
9J6G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9J6G entry

There are 3 chains in PDB entry 9J6G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ASN 24	VAL 1118
A	GLU 17	VAL 1118
C	GLU 17	VAL 1118

There are 66 helices in PDB entry 9J6G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	284	293	Right-handed alpha
Helix 2	AA2	B	354	360	Right-handed 310
Helix 3	AA3	B	374	378	Right-handed 310
Helix 4	AA4	B	396	401	Right-handed 310
Helix 5	AA5	B	407	412	Right-handed alpha
Helix 6	AA6	B	606	611	Right-handed alpha
Helix 7	AA7	B	612	616	Right-handed 310
Helix 8	AA8	B	718	724	Right-handed alpha
Helix 9	AA9	B	727	735	Right-handed alpha
Helix 10	AB1	B	736	738	Right-handed 310
Helix 11	AB2	B	739	764	Right-handed alpha
Helix 12	AB3	B	797	807	Right-handed alpha
Helix 13	AB4	B	830	838	Right-handed alpha
Helix 14	AB5	B	847	865	Right-handed alpha
Helix 15	AB6	B	867	871	Right-handed 310
Helix 16	AB7	B	878	889	Right-handed alpha
Helix 17	AB8	B	894	900	Right-handed alpha
Helix 18	AB9	B	900	922	Right-handed alpha
Helix 19	AC1	B	926	946	Right-handed alpha
Helix 20	AC2	B	947	949	Right-handed 310
Helix 21	AC3	B	957	963	Right-handed alpha
Helix 22	AC4	B	966	1014	Right-handed alpha
Helix 23	AC5	A	284	293	Right-handed alpha
Helix 24	AC6	A	356	361	Right-handed alpha
Helix 25	AC7	A	374	380	Right-handed 310
Helix 26	AC8	A	397	401	Right-handed 310
Helix 27	AC9	A	407	412	Right-handed alpha
Helix 28	AD1	A	606	611	Right-handed alpha
Helix 29	AD2	A	617	622	Right-handed alpha
Helix 30	AD3	A	718	724	Right-handed alpha
Helix 31	AD4	A	727	735	Right-handed alpha
Helix 32	AD5	A	736	738	Right-handed 310
Helix 33	AD6	A	739	764	Right-handed alpha
Helix 34	AD7	A	797	806	Right-handed alpha
Helix 35	AD8	A	830	836	Right-handed alpha
Helix 36	AD9	A	847	865	Right-handed alpha
Helix 37	AE1	A	867	871	Right-handed 310
Helix 38	AE2	A	878	890	Right-handed alpha
Helix 39	AE3	A	894	900	Right-handed alpha
Helix 40	AE4	A	900	922	Right-handed alpha
Helix 41	AE5	A	926	946	Right-handed alpha
Helix 42	AE6	A	947	949	Right-handed 310
Helix 43	AE7	A	957	963	Right-handed alpha
Helix 44	AE8	A	966	1014	Right-handed alpha
Helix 45	AE9	C	284	293	Right-handed alpha
Helix 46	AF1	C	355	361	Right-handed alpha
Helix 47	AF2	C	374	378	Right-handed 310
Helix 48	AF3	C	395	399	Right-handed alpha
Helix 49	AF4	C	407	412	Right-handed alpha
Helix 50	AF5	C	606	611	Right-handed alpha
Helix 51	AF6	C	617	622	Right-handed alpha
Helix 52	AF7	C	718	725	Right-handed alpha
Helix 53	AF8	C	727	735	Right-handed alpha
Helix 54	AF9	C	736	738	Right-handed 310
Helix 55	AG1	C	739	764	Right-handed alpha
Helix 56	AG2	C	797	807	Right-handed alpha
Helix 57	AG3	C	831	836	Right-handed alpha
Helix 58	AG4	C	847	865	Right-handed alpha
Helix 59	AG5	C	867	871	Right-handed 310
Helix 60	AG6	C	878	889	Right-handed alpha
Helix 61	AG7	C	894	900	Right-handed alpha
Helix 62	AG8	C	900	922	Right-handed alpha
Helix 63	AG9	C	926	946	Right-handed alpha
Helix 64	AH1	C	947	949	Right-handed 310
Helix 65	AH2	C	957	963	Right-handed alpha
Helix 66	AH3	C	966	1014	Right-handed alpha

There are 49 sheets in PDB entry 9J6G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	34	first strand
Strand 2	B	65	71	anti-parallel
Strand 3	B	253	259	anti-parallel
Strand 4	B	93	98	anti-parallel
Strand 5	B	184	193	anti-parallel
Strand 6	B	196	205	anti-parallel
Strand 7	B	216	226	anti-parallel
Strand 8	B	37	41	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	59	first strand
Strand 2	B	261	269	anti-parallel
Strand 3	B	275	280	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	88	first strand
Strand 2	B	233	239	anti-parallel
Strand 3	B	143	144	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	88	first strand
Strand 2	B	233	239	anti-parallel
Strand 3	B	106	110	anti-parallel
Strand 4	B	119	123	anti-parallel
Strand 5	B	129	134	anti-parallel
Strand 6	B	165	169	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	301	304	first strand
Strand 2	B	582	586	anti-parallel
Strand 3	B	596	600	anti-parallel
Strand 4	B	637	640	anti-parallel
Strand 5	B	632	633	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	315	316	first strand
Strand 2	B	526	528	parallel
Strand 3	B	535	541	anti-parallel
Strand 4	B	572	575	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	344	347	first strand
Strand 2	B	385	394	anti-parallel
Strand 3	B	494	503	anti-parallel
Strand 4	B	422	428	anti-parallel
Strand 5	B	367	370	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	439	441	first strand
Strand 2	B	479	481	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	460	461	first strand
Strand 2	B	475	476	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	643	644	first strand
Strand 2	B	671	677	parallel
Strand 3	B	659	665	anti-parallel
Strand 4	B	653	656	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	682	683	first strand
Strand 2	A	768	769	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	693	709	first strand
Strand 2	B	1040	1056	anti-parallel
Strand 3	B	1028	1037	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	714	717	first strand
Strand 2	B	839	842	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	777	778	first strand
Strand 2	B	781	782	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1101	1106	first strand
Strand 2	B	1067	1071	anti-parallel
Strand 3	B	1062	1064	anti-parallel
Strand 4	B	1114	1115	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1075	1078	first strand
Strand 2	B	1083	1086	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	34	first strand
Strand 2	A	65	71	anti-parallel
Strand 3	A	253	259	anti-parallel
Strand 4	A	93	99	anti-parallel
Strand 5	A	185	193	anti-parallel
Strand 6	A	196	204	anti-parallel
Strand 7	A	218	226	anti-parallel
Strand 8	A	40	41	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	59	first strand
Strand 2	A	261	266	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	A	233	237	anti-parallel
Strand 3	A	106	110	anti-parallel
Strand 4	A	119	122	anti-parallel
Strand 5	A	128	134	anti-parallel
Strand 6	A	165	170	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	143	first strand
Strand 2	A	155	160	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	304	first strand
Strand 2	A	582	586	anti-parallel
Strand 3	A	596	600	anti-parallel
Strand 4	A	637	640	anti-parallel
Strand 5	A	631	633	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	315	316	first strand
Strand 2	A	525	528	parallel
Strand 3	A	535	541	anti-parallel
Strand 4	A	572	575	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	344	347	first strand
Strand 2	A	385	394	anti-parallel
Strand 3	A	494	503	anti-parallel
Strand 4	A	422	428	anti-parallel
Strand 5	A	367	370	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	552	554	first strand
Strand 2	A	560	563	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	643	644	first strand
Strand 2	A	672	677	parallel
Strand 3	A	659	664	anti-parallel
Strand 4	A	653	656	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	682	683	first strand
Strand 2	C	768	769	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	693	709	first strand
Strand 2	A	1040	1058	anti-parallel
Strand 3	A	1028	1037	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	693	709	first strand
Strand 2	A	1040	1058	anti-parallel
Strand 3	A	1075	1078	anti-parallel
Strand 4	A	1083	1086	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	714	717	first strand
Strand 2	A	839	842	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	777	778	first strand
Strand 2	A	781	782	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1101	1106	first strand
Strand 2	A	1067	1071	anti-parallel
Strand 3	A	1062	1064	anti-parallel
Strand 4	A	1114	1115	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	34	first strand
Strand 2	C	65	72	anti-parallel
Strand 3	C	253	258	anti-parallel
Strand 4	C	93	99	anti-parallel
Strand 5	C	184	193	anti-parallel
Strand 6	C	196	204	anti-parallel
Strand 7	C	216	225	anti-parallel
Strand 8	C	37	41	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	34	first strand
Strand 2	C	65	72	anti-parallel
Strand 3	C	81	82	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	59	first strand
Strand 2	C	261	269	anti-parallel
Strand 3	C	275	280	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	88	first strand
Strand 2	C	233	237	anti-parallel
Strand 3	C	106	110	anti-parallel
Strand 4	C	119	123	anti-parallel
Strand 5	C	129	134	anti-parallel
Strand 6	C	165	169	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	138	first strand
Strand 2	C	157	160	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	146	first strand
Strand 2	C	151	153	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	304	first strand
Strand 2	C	582	586	anti-parallel
Strand 3	C	596	600	anti-parallel
Strand 4	C	637	640	anti-parallel
Strand 5	C	631	633	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	315	316	first strand
Strand 2	C	526	528	parallel
Strand 3	C	535	541	anti-parallel
Strand 4	C	572	575	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	344	347	first strand
Strand 2	C	385	394	anti-parallel
Strand 3	C	494	503	anti-parallel
Strand 4	C	422	428	anti-parallel
Strand 5	C	367	370	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	439	441	first strand
Strand 2	C	479	481	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	460	461	first strand
Strand 2	C	475	476	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	552	553	first strand
Strand 2	C	562	563	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	643	644	first strand
Strand 2	C	672	677	parallel
Strand 3	C	659	664	anti-parallel
Strand 4	C	653	656	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	692	695	first strand
Strand 2	C	1054	1059	anti-parallel
Strand 3	C	1075	1078	anti-parallel
Strand 4	C	1083	1087	anti-parallel
Strand 5	C	1090	1094	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	699	709	first strand
Strand 2	C	1040	1050	anti-parallel
Strand 3	C	1028	1037	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	714	717	first strand
Strand 2	C	839	842	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	777	778	first strand
Strand 2	C	781	782	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1101	1106	first strand
Strand 2	C	1067	1071	anti-parallel
Strand 3	C	1062	1064	anti-parallel
Strand 4	C	1114	1115	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9J6G

Analysis of interatomic Contacts of Structural Units in PDB entry:
9J6G