Analysis of interatomic Contacts of Structural Units in PDB entry:
9J7A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J7A entry

There are 6 chains in PDB entry 9J7A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 627
B
 LEU 57ILE 129
C
 GLN 67THR 128
F
 UNK 1UNK 11
D
 MET 1HIS 627
E
 UNK 1UNK 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 9J7A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 14Right-handed alpha
Helix 2
AA2
A
16 23Right-handed alpha
Helix 3
AA3
A
28 37Right-handed alpha
Helix 4
AA4
A
41 45Right-handed 310
Helix 5
AA5
A
48 57Right-handed alpha
Helix 6
AA6
A
58 67Right-handed alpha
Helix 7
AA7
A
90 99Right-handed alpha
Helix 8
AA8
A
100 111Right-handed alpha
Helix 9
AA9
A
123 132Right-handed alpha
Helix 10
AB1
A
133 143Right-handed alpha
Helix 11
AB2
A
156 164Right-handed alpha
Helix 12
AB3
A
166 176Right-handed alpha
Helix 13
AB4
A
199 209Right-handed alpha
Helix 14
AB5
A
221 229Right-handed alpha
Helix 15
AB6
A
231 240Right-handed alpha
Helix 16
AB7
A
245 262Right-handed alpha
Helix 17
AB8
A
268 284Right-handed alpha
Helix 18
AB9
A
299 303Right-handed 310
Helix 19
AC1
A
310 317Right-handed alpha
Helix 20
AC2
A
320 337Right-handed alpha
Helix 21
AC3
A
340 342Right-handed 310
Helix 22
AC4
A
343 357Right-handed alpha
Helix 23
AC5
A
359 377Right-handed alpha
Helix 24
AC6
A
381 398Right-handed alpha
Helix 25
AC7
A
403 428Right-handed alpha
Helix 26
AC8
A
432 456Right-handed alpha
Helix 27
AC9
A
461 478Right-handed alpha
Helix 28
AD1
A
486 493Right-handed alpha
Helix 29
AD2
A
501 506Right-handed 310
Helix 30
AD3
A
511 521Right-handed alpha
Helix 31
AD4
A
534 540Right-handed alpha
Helix 32
AD5
A
545 547Right-handed 310
Helix 33
AD6
A
548 562Right-handed alpha
Helix 34
AD7
A
582 593Right-handed alpha
Helix 35
AD8
A
596 608Right-handed alpha
Helix 36
AD9
A
617 627Right-handed alpha
Helix 37
AE1
B
63 84Right-handed alpha
Helix 38
AE2
B
85 101Right-handed alpha
Helix 39
AE3
B
103 110Right-handed alpha
Helix 40
AE4
B
111 113Right-handed 310
Helix 41
AE5
B
115 125Right-handed alpha
Helix 42
AE6
C
68 83Right-handed alpha
Helix 43
AE7
C
85 100Right-handed alpha
Helix 44
AE8
C
102 114Right-handed alpha
Helix 45
AE9
C
115 126Right-handed alpha
Helix 46
AF1
F
3 11Right-handed alpha
Helix 47
AF2
D
2 14Right-handed alpha
Helix 48
AF3
D
16 26Right-handed alpha
Helix 49
AF4
D
28 36Right-handed alpha
Helix 50
AF5
D
48 57Right-handed alpha
Helix 51
AF6
D
58 69Right-handed alpha
Helix 52
AF7
D
90 99Right-handed alpha
Helix 53
AF8
D
100 111Right-handed alpha
Helix 54
AF9
D
123 132Right-handed alpha
Helix 55
AG1
D
133 143Right-handed alpha
Helix 56
AG2
D
156 164Right-handed alpha
Helix 57
AG3
D
166 176Right-handed alpha
Helix 58
AG4
D
189 198Right-handed alpha
Helix 59
AG5
D
199 209Right-handed alpha
Helix 60
AG6
D
221 229Right-handed alpha
Helix 61
AG7
D
231 240Right-handed alpha
Helix 62
AG8
D
245 262Right-handed alpha
Helix 63
AG9
D
268 285Right-handed alpha
Helix 64
AH1
D
299 303Right-handed 310
Helix 65
AH2
D
310 317Right-handed alpha
Helix 66
AH3
D
320 337Right-handed alpha
Helix 67
AH4
D
344 357Right-handed alpha
Helix 68
AH5
D
359 377Right-handed alpha
Helix 69
AH6
D
381 398Right-handed alpha
Helix 70
AH7
D
403 428Right-handed alpha
Helix 71
AH8
D
432 457Right-handed alpha
Helix 72
AH9
D
460 478Right-handed alpha
Helix 73
AI1
D
486 493Right-handed alpha
Helix 74
AI2
D
502 507Right-handed alpha
Helix 75
AI3
D
511 522Right-handed alpha
Helix 76
AI4
D
534 541Right-handed alpha
Helix 77
AI5
D
548 563Right-handed alpha
Helix 78
AI6
D
582 593Right-handed alpha
Helix 79
AI7
D
596 608Right-handed alpha
Helix 80
AI8
D
617 627Right-handed alpha
Helix 81
AI9
E
2 10Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9J7A.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 81first strand
Strand 2
D
84 89anti-parallel
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