Analysis of interatomic Contacts of Structural Units in PDB entry:
9J7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J7B entry

There are 11 chains in PDB entry 9J7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
J
 MET 1HIS 627
A
 MET 1HIS 627
B
 LEU 57THR 128
G
 ALA 1PRO 11
D
 UNK 1UNK 12
O
 MET 1GLN 592
P
 MET 1ALA 562
Q
 ASP 62THR 128
R
 UNK 1UNK 9
S
 VAL 66LYS 125
C
 VAL 66LEU 126
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are151 helices in PDB entry 9J7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
J
1 15Right-handed alpha
Helix 2
AA2
J
16 23Right-handed alpha
Helix 3
AA3
J
28 37Right-handed alpha
Helix 4
AA4
J
48 56Right-handed alpha
Helix 5
AA5
J
58 69Right-handed alpha
Helix 6
AA6
J
90 99Right-handed alpha
Helix 7
AA7
J
101 110Right-handed alpha
Helix 8
AA8
J
123 132Right-handed alpha
Helix 9
AA9
J
133 143Right-handed alpha
Helix 10
AB1
J
156 164Right-handed alpha
Helix 11
AB2
J
166 176Right-handed alpha
Helix 12
AB3
J
189 198Right-handed alpha
Helix 13
AB4
J
199 210Right-handed alpha
Helix 14
AB5
J
221 227Right-handed alpha
Helix 15
AB6
J
231 242Right-handed alpha
Helix 16
AB7
J
245 262Right-handed alpha
Helix 17
AB8
J
268 285Right-handed alpha
Helix 18
AB9
J
310 318Right-handed alpha
Helix 19
AC1
J
320 337Right-handed alpha
Helix 20
AC2
J
344 357Right-handed alpha
Helix 21
AC3
J
359 377Right-handed alpha
Helix 22
AC4
J
382 398Right-handed alpha
Helix 23
AC5
J
403 428Right-handed alpha
Helix 24
AC6
J
432 457Right-handed alpha
Helix 25
AC7
J
460 478Right-handed alpha
Helix 26
AC8
J
486 493Right-handed alpha
Helix 27
AC9
J
502 507Right-handed alpha
Helix 28
AD1
J
511 522Right-handed alpha
Helix 29
AD2
J
534 541Right-handed alpha
Helix 30
AD3
J
548 563Right-handed alpha
Helix 31
AD4
J
582 592Right-handed alpha
Helix 32
AD5
J
596 609Right-handed alpha
Helix 33
AD6
J
617 627Right-handed alpha
Helix 34
AD7
A
2 15Right-handed alpha
Helix 35
AD8
A
17 24Right-handed alpha
Helix 36
AD9
A
28 37Right-handed alpha
Helix 37
AE1
A
48 57Right-handed alpha
Helix 38
AE2
A
58 68Right-handed alpha
Helix 39
AE3
A
90 99Right-handed alpha
Helix 40
AE4
A
100 111Right-handed alpha
Helix 41
AE5
A
123 132Right-handed alpha
Helix 42
AE6
A
133 143Right-handed alpha
Helix 43
AE7
A
156 164Right-handed alpha
Helix 44
AE8
A
166 176Right-handed alpha
Helix 45
AE9
A
199 209Right-handed alpha
Helix 46
AF1
A
221 229Right-handed alpha
Helix 47
AF2
A
231 240Right-handed alpha
Helix 48
AF3
A
245 262Right-handed alpha
Helix 49
AF4
A
268 284Right-handed alpha
Helix 50
AF5
A
310 317Right-handed alpha
Helix 51
AF6
A
320 337Right-handed alpha
Helix 52
AF7
A
340 342Right-handed 310
Helix 53
AF8
A
343 357Right-handed alpha
Helix 54
AF9
A
359 378Right-handed alpha
Helix 55
AG1
A
381 398Right-handed alpha
Helix 56
AG2
A
403 428Right-handed alpha
Helix 57
AG3
A
432 457Right-handed alpha
Helix 58
AG4
A
460 478Right-handed alpha
Helix 59
AG5
A
486 493Right-handed alpha
Helix 60
AG6
A
502 507Right-handed alpha
Helix 61
AG7
A
511 521Right-handed alpha
Helix 62
AG8
A
534 541Right-handed alpha
Helix 63
AG9
A
548 561Right-handed alpha
Helix 64
AH1
A
577 581Right-handed 310
Helix 65
AH2
A
582 593Right-handed alpha
Helix 66
AH3
A
602 608Right-handed alpha
Helix 67
AH4
A
617 627Right-handed alpha
Helix 68
AH5
B
67 84Right-handed alpha
Helix 69
AH6
B
85 100Right-handed alpha
Helix 70
AH7
B
103 105Right-handed 310
Helix 71
AH8
B
106 111Right-handed alpha
Helix 72
AH9
B
115 125Right-handed alpha
Helix 73
AI1
G
4 8Right-handed 310
Helix 74
AI2
D
2 9Right-handed alpha
Helix 75
AI3
O
2 14Right-handed alpha
Helix 76
AI4
O
16 25Right-handed alpha
Helix 77
AI5
O
29 38Right-handed alpha
Helix 78
AI6
O
41 45Right-handed 310
Helix 79
AI7
O
48 56Right-handed alpha
Helix 80
AI8
O
58 69Right-handed alpha
Helix 81
AI9
O
90 98Right-handed alpha
Helix 82
AJ1
O
100 111Right-handed alpha
Helix 83
AJ2
O
123 132Right-handed alpha
Helix 84
AJ3
O
133 143Right-handed alpha
Helix 85
AJ4
O
156 162Right-handed alpha
Helix 86
AJ5
O
166 176Right-handed alpha
Helix 87
AJ6
O
189 197Right-handed alpha
Helix 88
AJ7
O
199 210Right-handed alpha
Helix 89
AJ8
O
221 228Right-handed alpha
Helix 90
AJ9
O
232 241Right-handed alpha
Helix 91
AK1
O
245 260Right-handed alpha
Helix 92
AK2
O
268 284Right-handed alpha
Helix 93
AK3
O
312 317Right-handed alpha
Helix 94
AK4
O
320 337Right-handed alpha
Helix 95
AK5
O
340 357Right-handed alpha
Helix 96
AK6
O
359 378Right-handed alpha
Helix 97
AK7
O
381 398Right-handed alpha
Helix 98
AK8
O
403 428Right-handed alpha
Helix 99
AK9
O
432 457Right-handed alpha
Helix 100
AL1
O
460 478Right-handed alpha
Helix 101
AL2
O
486 493Right-handed alpha
Helix 102
AL3
O
502 507Right-handed alpha
Helix 103
AL4
O
511 521Right-handed alpha
Helix 104
AL5
O
534 541Right-handed alpha
Helix 105
AL6
O
548 563Right-handed alpha
Helix 106
AL7
O
582 592Right-handed alpha
Helix 107
AL8
P
2 14Right-handed alpha
Helix 108
AL9
P
16 25Right-handed alpha
Helix 109
AM1
P
28 38Right-handed alpha
Helix 110
AM2
P
48 57Right-handed alpha
Helix 111
AM3
P
58 65Right-handed alpha
Helix 112
AM4
P
80 84Right-handed 310
Helix 113
AM5
P
90 98Right-handed alpha
Helix 114
AM6
P
100 111Right-handed alpha
Helix 115
AM7
P
123 132Right-handed alpha
Helix 116
AM8
P
133 144Right-handed alpha
Helix 117
AM9
P
156 164Right-handed alpha
Helix 118
AN1
P
166 174Right-handed alpha
Helix 119
AN2
P
199 209Right-handed alpha
Helix 120
AN3
P
221 229Right-handed alpha
Helix 121
AN4
P
231 240Right-handed alpha
Helix 122
AN5
P
245 261Right-handed alpha
Helix 123
AN6
P
268 284Right-handed alpha
Helix 124
AN7
P
310 317Right-handed alpha
Helix 125
AN8
P
320 337Right-handed alpha
Helix 126
AN9
P
340 357Right-handed alpha
Helix 127
AO1
P
359 377Right-handed alpha
Helix 128
AO2
P
381 398Right-handed alpha
Helix 129
AO3
P
403 428Right-handed alpha
Helix 130
AO4
P
433 457Right-handed alpha
Helix 131
AO5
P
460 478Right-handed alpha
Helix 132
AO6
P
486 491Right-handed alpha
Helix 133
AO7
P
501 505Right-handed 310
Helix 134
AO8
P
511 522Right-handed alpha
Helix 135
AO9
P
534 542Right-handed alpha
Helix 136
AP1
P
543 548Right-handed alpha
Helix 137
AP2
P
548 555Right-handed alpha
Helix 138
AP3
P
555 560Right-handed alpha
Helix 139
AP4
Q
63 84Right-handed alpha
Helix 140
AP5
Q
85 95Right-handed alpha
Helix 141
AP6
Q
102 114Right-handed alpha
Helix 142
AP7
Q
115 126Right-handed alpha
Helix 143
AP8
S
67 77Right-handed alpha
Helix 144
AP9
S
78 84Right-handed alpha
Helix 145
AQ1
S
85 100Right-handed alpha
Helix 146
AQ2
S
102 114Right-handed alpha
Helix 147
AQ3
S
115 125Right-handed alpha
Helix 148
AQ4
C
67 83Right-handed alpha
Helix 149
AQ5
C
85 100Right-handed alpha
Helix 150
AQ6
C
104 113Right-handed alpha
Helix 151
AQ7
C
115 126Right-handed alpha
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There are 3 sheets in PDB entry 9J7B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
77 80first strand
Strand 2
J
85 88anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
45 46anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
79 80first strand
Strand 2
O
85 86anti-parallel
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