Analysis of interatomic Contacts of Structural Units in PDB entry:
9J7D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J7D entry

There are 2 chains in PDB entry 9J7D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5VAL 646
B
 PRO 5VAL 646
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 9J7D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 14Right-handed 310
Helix 2
AA2
A
34 61Right-handed alpha
Helix 3
AA3
A
83 92Right-handed alpha
Helix 4
AA4
A
96 108Right-handed alpha
Helix 5
AA5
A
111 119Right-handed alpha
Helix 6
AA6
A
121 137Right-handed alpha
Helix 7
AA7
A
145 153Right-handed alpha
Helix 8
AA8
A
155 189Right-handed alpha
Helix 9
AA9
A
191 209Right-handed alpha
Helix 10
AB1
A
217 240Right-handed alpha
Helix 11
AB2
A
246 255Right-handed alpha
Helix 12
AB3
A
281 285Right-handed 310
Helix 13
AB4
A
291 312Right-handed alpha
Helix 14
AB5
A
312 321Right-handed alpha
Helix 15
AB6
A
323 328Right-handed alpha
Helix 16
AB7
A
329 339Right-handed alpha
Helix 17
AB8
A
339 356Right-handed alpha
Helix 18
AB9
A
361 367Right-handed alpha
Helix 19
AC1
A
369 380Right-handed alpha
Helix 20
AC2
A
382 414Right-handed alpha
Helix 21
AC3
A
424 454Right-handed alpha
Helix 22
AC4
A
458 463Right-handed alpha
Helix 23
AC5
A
463 469Right-handed alpha
Helix 24
AC6
A
471 480Right-handed alpha
Helix 25
AC7
A
485 512Right-handed alpha
Helix 26
AC8
A
516 521Right-handed alpha
Helix 27
AC9
A
522 548Right-handed alpha
Helix 28
AD1
A
556 560Right-handed 310
Helix 29
AD2
A
581 605Right-handed alpha
Helix 30
AD3
A
605 612Right-handed alpha
Helix 31
AD4
A
613 615Right-handed 310
Helix 32
AD5
A
620 643Right-handed alpha
Helix 33
AD6
B
10 14Right-handed 310
Helix 34
AD7
B
34 61Right-handed alpha
Helix 35
AD8
B
83 92Right-handed alpha
Helix 36
AD9
B
96 108Right-handed alpha
Helix 37
AE1
B
111 119Right-handed alpha
Helix 38
AE2
B
121 137Right-handed alpha
Helix 39
AE3
B
145 153Right-handed alpha
Helix 40
AE4
B
155 189Right-handed alpha
Helix 41
AE5
B
191 209Right-handed alpha
Helix 42
AE6
B
217 240Right-handed alpha
Helix 43
AE7
B
246 255Right-handed alpha
Helix 44
AE8
B
281 285Right-handed 310
Helix 45
AE9
B
291 312Right-handed alpha
Helix 46
AF1
B
312 321Right-handed alpha
Helix 47
AF2
B
323 328Right-handed alpha
Helix 48
AF3
B
329 339Right-handed alpha
Helix 49
AF4
B
339 356Right-handed alpha
Helix 50
AF5
B
361 367Right-handed alpha
Helix 51
AF6
B
369 380Right-handed alpha
Helix 52
AF7
B
382 414Right-handed alpha
Helix 53
AF8
B
424 454Right-handed alpha
Helix 54
AF9
B
458 463Right-handed alpha
Helix 55
AG1
B
463 469Right-handed alpha
Helix 56
AG2
B
471 480Right-handed alpha
Helix 57
AG3
B
485 512Right-handed alpha
Helix 58
AG4
B
516 521Right-handed alpha
Helix 59
AG5
B
522 548Right-handed alpha
Helix 60
AG6
B
556 560Right-handed 310
Helix 61
AG7
B
581 605Right-handed alpha
Helix 62
AG8
B
605 612Right-handed alpha
Helix 63
AG9
B
613 615Right-handed 310
Helix 64
AH1
B
620 643Right-handed alpha
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There are no sheets in PDB entry 9J7D
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