Analysis of interatomic Contacts of Structural Units in PDB entry:
9J7J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J7J entry

There is 1 chain in PDB entry 9J7J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 101ARG 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 9J7J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
133 139Right-handed alpha
Helix 2
AA2
A
157 166Right-handed alpha
Helix 3
AA3
A
180 189Right-handed alpha
Helix 4
AA4
A
204 212Right-handed alpha
Helix 5
AA5
A
228 236Right-handed alpha
Helix 6
AA6
A
251 262Right-handed alpha
Helix 7
AA7
A
276 285Right-handed alpha
Helix 8
AA8
A
300 310Right-handed alpha
Helix 9
AA9
A
324 334Right-handed alpha
Helix 10
AB1
A
347 358Right-handed alpha
Helix 11
AB2
A
394 403Right-handed alpha
Helix 12
AB3
A
418 427Right-handed alpha
Helix 13
AB4
A
442 451Right-handed alpha
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There are 2 sheets in PDB entry 9J7J. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 106first strand
Strand 2
A
125 129parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 197first strand
Strand 2
A
219 221parallel
Strand 3
A
243 245parallel
Strand 4
A
267 269parallel
Strand 5
A
291 293parallel
Strand 6
A
315 317parallel
Strand 7
A
339 341parallel
Strand 8
A
363 365parallel
Strand 9
A
385 387parallel
Strand 10
A
409 411parallel
Strand 11
A
433 435parallel
Strand 12
A
457 459parallel
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