Analysis of interatomic Contacts of Structural Units in PDB entry:
9J7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J7M entry

There is 1 chain in PDB entry 9J7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 38ARG 587
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9J7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 59Right-handed alpha
Helix 2
AA2
A
60 65Right-handed alpha
Helix 3
AA3
A
65 74Right-handed alpha
Helix 4
AA4
A
79 90Right-handed alpha
Helix 5
AA5
A
90 106Right-handed alpha
Helix 6
AA6
A
111 115Right-handed 310
Helix 7
AA7
A
121 138Right-handed alpha
Helix 8
AA8
A
139 152Right-handed alpha
Helix 9
AA9
A
193 202Right-handed alpha
Helix 10
AB1
A
217 237Right-handed alpha
Helix 11
AB2
A
242 250Right-handed alpha
Helix 12
AB3
A
251 266Right-handed alpha
Helix 13
AB4
A
269 279Right-handed alpha
Helix 14
AB5
A
281 286Right-handed 310
Helix 15
AB6
A
287 302Right-handed alpha
Helix 16
AB7
A
307 314Right-handed alpha
Helix 17
AB8
A
323 356Right-handed alpha
Helix 18
AB9
A
358 362Right-handed 310
Helix 19
AC1
A
368 379Right-handed alpha
Helix 20
AC2
A
383 416Right-handed alpha
Helix 21
AC3
A
427 444Right-handed alpha
Helix 22
AC4
A
445 447Right-handed 310
Helix 23
AC5
A
450 462Right-handed alpha
Helix 24
AC6
A
465 482Right-handed alpha
Helix 25
AC7
A
484 497Right-handed alpha
Helix 26
AC8
A
501 510Right-handed alpha
Helix 27
AC9
A
510 526Right-handed alpha
Helix 28
AD1
A
539 555Right-handed alpha
Helix 29
AD2
A
555 567Right-handed alpha
Helix 30
AD3
A
571 580Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9J7M.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
531 532first strand
Strand 2
A
536 537anti-parallel
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