Analysis of interatomic Contacts of Structural Units in PDB entry:
9J8C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J8C entry

There is 1 chain in PDB entry 9J8C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 46PRO 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 9J8C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 64Right-handed alpha
Helix 2
AA2
A
65 70Right-handed alpha
Helix 3
AA3
A
70 79Right-handed alpha
Helix 4
AA4
A
80 83Right-handed 310
Helix 5
AA5
A
84 95Right-handed alpha
Helix 6
AA6
A
95 111Right-handed alpha
Helix 7
AA7
A
115 120Right-handed 310
Helix 8
AA8
A
121 124Right-handed 310
Helix 9
AA9
A
125 155Right-handed alpha
Helix 10
AB1
A
209 218Right-handed alpha
Helix 11
AB2
A
233 253Right-handed alpha
Helix 12
AB3
A
263 283Right-handed alpha
Helix 13
AB4
A
285 295Right-handed alpha
Helix 14
AB5
A
303 319Right-handed alpha
Helix 15
AB6
A
323 330Right-handed alpha
Helix 16
AB7
A
337 372Right-handed alpha
Helix 17
AB8
A
385 397Right-handed alpha
Helix 18
AB9
A
399 435Right-handed alpha
Helix 19
AC1
A
442 458Right-handed alpha
Helix 20
AC2
A
459 463Right-handed 310
Helix 21
AC3
A
465 477Right-handed alpha
Helix 22
AC4
A
480 496Right-handed alpha
Helix 23
AC5
A
498 511Right-handed alpha
Helix 24
AC6
A
515 524Right-handed alpha
Helix 25
AC7
A
524 540Right-handed alpha
Helix 26
AC8
A
552 568Right-handed alpha
Helix 27
AC9
A
568 579Right-handed alpha
Helix 28
AD1
A
585 593Right-handed alpha
Helix 29
AD2
A
604 608Right-handed 310
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There are no sheets in PDB entry 9J8C
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