Analysis of interatomic Contacts of Structural Units in PDB entry:
9J91


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9J91 entry

There is 1 chain in PDB entry 9J91 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 6GLY 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 9J91. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 21Right-handed alpha
Helix 2
AA2
A
31 44Right-handed alpha
Helix 3
AA3
A
47 54Right-handed alpha
Helix 4
AA4
A
106 117Right-handed alpha
Helix 5
AA5
A
128 141Right-handed alpha
Helix 6
AA6
A
180 184Right-handed 310
Helix 7
AA7
A
240 248Right-handed alpha
Helix 8
AA8
A
249 259Right-handed alpha
Helix 9
AA9
A
279 286Right-handed alpha
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There are 3 sheets in PDB entry 9J91. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
369 375anti-parallel
Strand 3
A
357 363anti-parallel
Strand 4
A
228 235anti-parallel
Strand 5
A
216 222anti-parallel
Strand 6
A
196 212anti-parallel
Strand 7
A
185 190anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
369 375anti-parallel
Strand 3
A
357 363anti-parallel
Strand 4
A
228 235anti-parallel
Strand 5
A
216 222anti-parallel
Strand 6
A
196 212anti-parallel
Strand 7
A
261 270anti-parallel
Strand 8
A
349 352parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 124first strand
Strand 2
A
90 100parallel
Strand 3
A
163 172anti-parallel
Strand 4
A
311 322parallel
Strand 5
A
272 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il