Analysis of interatomic Contacts of Structural Units in PDB entry:
9JBG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JBG entry

There are 2 chains in PDB entry 9JBG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 35GLN 835
B
 PRO 35HIS 716
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 9JBG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 40Right-handed 310
Helix 2
AA2
A
41 62Right-handed alpha
Helix 3
AA3
A
66 80Right-handed alpha
Helix 4
AA4
A
80 92Right-handed alpha
Helix 5
AA5
A
99 124Right-handed alpha
Helix 6
AA6
A
129 143Right-handed alpha
Helix 7
AA7
A
149 159Right-handed alpha
Helix 8
AA8
A
164 177Right-handed alpha
Helix 9
AA9
A
179 196Right-handed alpha
Helix 10
AB1
A
207 216Right-handed alpha
Helix 11
AB2
A
220 233Right-handed alpha
Helix 12
AB3
A
238 250Right-handed alpha
Helix 13
AB4
A
252 263Right-handed alpha
Helix 14
AB5
A
272 288Right-handed alpha
Helix 15
AB6
A
288 302Right-handed alpha
Helix 16
AB7
A
306 320Right-handed alpha
Helix 17
AB8
A
326 337Right-handed alpha
Helix 18
AB9
A
340 367Right-handed alpha
Helix 19
AC1
A
371 405Right-handed alpha
Helix 20
AC2
A
411 435Right-handed alpha
Helix 21
AC3
A
440 449Right-handed alpha
Helix 22
AC4
A
449 473Right-handed alpha
Helix 23
AC5
A
481 490Right-handed alpha
Helix 24
AC6
A
492 503Right-handed alpha
Helix 25
AC7
A
518 544Right-handed alpha
Helix 26
AC8
A
639 653Right-handed alpha
Helix 27
AC9
A
654 682Right-handed alpha
Helix 28
AD1
A
687 711Right-handed alpha
Helix 29
AD2
A
745 758Right-handed alpha
Helix 30
AD3
A
762 767Right-handed alpha
Helix 31
AD4
A
783 793Right-handed alpha
Helix 32
AD5
A
798 812Right-handed alpha
Helix 33
AD6
B
38 40Right-handed 310
Helix 34
AD7
B
41 62Right-handed alpha
Helix 35
AD8
B
66 80Right-handed alpha
Helix 36
AD9
B
80 93Right-handed alpha
Helix 37
AE1
B
99 125Right-handed alpha
Helix 38
AE2
B
126 128Right-handed 310
Helix 39
AE3
B
129 134Right-handed alpha
Helix 40
AE4
B
136 141Right-handed alpha
Helix 41
AE5
B
150 159Right-handed alpha
Helix 42
AE6
B
164 196Right-handed alpha
Helix 43
AE7
B
211 216Right-handed alpha
Helix 44
AE8
B
217 233Right-handed alpha
Helix 45
AE9
B
238 250Right-handed alpha
Helix 46
AF1
B
252 263Right-handed alpha
Helix 47
AF2
B
275 288Right-handed alpha
Helix 48
AF3
B
288 302Right-handed alpha
Helix 49
AF4
B
306 320Right-handed alpha
Helix 50
AF5
B
326 337Right-handed alpha
Helix 51
AF6
B
340 367Right-handed alpha
Helix 52
AF7
B
371 404Right-handed alpha
Helix 53
AF8
B
411 435Right-handed alpha
Helix 54
AF9
B
440 446Right-handed alpha
Helix 55
AG1
B
446 472Right-handed alpha
Helix 56
AG2
B
481 489Right-handed alpha
Helix 57
AG3
B
491 493Right-handed 310
Helix 58
AG4
B
494 502Right-handed alpha
Helix 59
AG5
B
518 544Right-handed alpha
Helix 60
AG6
B
655 682Right-handed alpha
Helix 61
AG7
B
688 701Right-handed alpha
Helix 62
AG8
B
703 712Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9JBG.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
780 782first strand
Strand 2
A
830 832anti-parallel
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