Analysis of interatomic Contacts of Structural Units in PDB entry:
9JBS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JBS entry

There is 1 chain in PDB entry 9JBS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4GLN 545
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9JBS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 11Right-handed alpha
Helix 2
AA2
A
11 27Right-handed alpha
Helix 3
AA3
A
28 31Right-handed 310
Helix 4
AA4
A
32 43Right-handed alpha
Helix 5
AA5
A
46 50Right-handed 310
Helix 6
AA6
A
81 102Right-handed alpha
Helix 7
AA7
A
102 114Right-handed alpha
Helix 8
AA8
A
114 139Right-handed alpha
Helix 9
AA9
A
139 144Right-handed alpha
Helix 10
AB1
A
145 166Right-handed alpha
Helix 11
AB2
A
167 172Right-handed 310
Helix 12
AB3
A
175 190Right-handed alpha
Helix 13
AB4
A
192 203Right-handed alpha
Helix 14
AB5
A
206 228Right-handed alpha
Helix 15
AB6
A
315 321Right-handed alpha
Helix 16
AB7
A
321 353Right-handed alpha
Helix 17
AB8
A
356 371Right-handed alpha
Helix 18
AB9
A
372 386Right-handed alpha
Helix 19
AC1
A
416 444Right-handed alpha
Helix 20
AC2
A
449 475Right-handed alpha
Helix 21
AC3
A
477 479Right-handed 310
Helix 22
AC4
A
480 497Right-handed alpha
Helix 23
AC5
A
498 507Right-handed alpha
Helix 24
AC6
A
508 511Right-handed 310
Helix 25
AC7
A
514 526Right-handed alpha
Helix 26
AC8
A
529 545Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9JBS.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 75first strand
Strand 2
A
78 80anti-parallel
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