Analysis of interatomic Contacts of Structural Units in PDB entry:
9JC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JC9 entry

There is 1 chain in PDB entry 9JC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 25LEU 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9JC9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 39Right-handed 310
Helix 2
AA2
A
41 47Right-handed 310
Helix 3
AA3
A
60 66Right-handed alpha
Helix 4
AA4
A
114 117Right-handed 310
Helix 5
AA5
A
118 124Right-handed alpha
Helix 6
AA6
A
132 137Right-handed alpha
Helix 7
AA7
A
138 149Right-handed alpha
Helix 8
AA8
A
167 186Right-handed alpha
Helix 9
AA9
A
200 217Right-handed alpha
Helix 10
AB1
A
233 242Right-handed alpha
Helix 11
AB2
A
246 261Right-handed alpha
Helix 12
AB3
A
261 269Right-handed alpha
Helix 13
AB4
A
270 272Right-handed 310
Helix 14
AB5
A
273 284Right-handed alpha
Helix 15
AB6
A
289 294Right-handed alpha
Helix 16
AB7
A
301 306Right-handed alpha
Helix 17
AB8
A
316 324Right-handed alpha
Helix 18
AB9
A
354 368Right-handed alpha
Helix 19
AC1
A
381 389Right-handed alpha
Helix 20
AC2
A
389 402Right-handed alpha
Helix 21
AC3
A
424 430Right-handed alpha
Helix 22
AC4
A
430 439Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9JC9.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 57first strand
Strand 2
A
69 78anti-parallel
Strand 3
A
84 93anti-parallel
Strand 4
A
152 156anti-parallel
Strand 5
A
102 107parallel
Strand 6
A
193 199parallel
Strand 7
A
221 228parallel
Strand 8
A
341 347parallel
Strand 9
A
371 377parallel
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