Analysis of interatomic Contacts of Structural Units in PDB entry:
9JCE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JCE entry

There are 3 chains in PDB entry 9JCE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 627
C
 UNK 0UNK 8
B
 LYS 61THR 128
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 9JCE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 14Right-handed alpha
Helix 2
AA2
A
16 24Right-handed alpha
Helix 3
AA3
A
29 37Right-handed alpha
Helix 4
AA4
A
48 56Right-handed alpha
Helix 5
AA5
A
58 68Right-handed alpha
Helix 6
AA6
A
90 97Right-handed alpha
Helix 7
AA7
A
100 110Right-handed alpha
Helix 8
AA8
A
123 132Right-handed alpha
Helix 9
AA9
A
133 143Right-handed alpha
Helix 10
AB1
A
156 165Right-handed alpha
Helix 11
AB2
A
166 176Right-handed alpha
Helix 12
AB3
A
191 198Right-handed alpha
Helix 13
AB4
A
199 209Right-handed alpha
Helix 14
AB5
A
221 229Right-handed alpha
Helix 15
AB6
A
231 239Right-handed alpha
Helix 16
AB7
A
246 261Right-handed alpha
Helix 17
AB8
A
268 284Right-handed alpha
Helix 18
AB9
A
299 303Right-handed 310
Helix 19
AC1
A
310 315Right-handed alpha
Helix 20
AC2
A
316 318Right-handed 310
Helix 21
AC3
A
320 337Right-handed alpha
Helix 22
AC4
A
340 342Right-handed 310
Helix 23
AC5
A
343 357Right-handed alpha
Helix 24
AC6
A
359 376Right-handed alpha
Helix 25
AC7
A
381 398Right-handed alpha
Helix 26
AC8
A
403 428Right-handed alpha
Helix 27
AC9
A
432 456Right-handed alpha
Helix 28
AD1
A
460 476Right-handed alpha
Helix 29
AD2
A
486 492Right-handed alpha
Helix 30
AD3
A
511 522Right-handed alpha
Helix 31
AD4
A
534 541Right-handed alpha
Helix 32
AD5
A
548 563Right-handed alpha
Helix 33
AD6
A
575 580Right-handed alpha
Helix 34
AD7
A
582 593Right-handed alpha
Helix 35
AD8
A
596 609Right-handed alpha
Helix 36
AD9
A
617 627Right-handed alpha
Helix 37
AE1
C
2 7Right-handed alpha
Helix 38
AE2
B
63 84Right-handed alpha
Helix 39
AE3
B
85 98Right-handed alpha
Helix 40
AE4
B
103 110Right-handed alpha
Helix 41
AE5
B
115 126Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9JCE.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
45 47anti-parallel
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