Analysis of interatomic Contacts of Structural Units in PDB entry:
9JCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JCZ entry

There is 1 chain in PDB entry 9JCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 39GLN 567
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 9JCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 58Right-handed alpha
Helix 2
AA2
A
60 65Right-handed alpha
Helix 3
AA3
A
65 74Right-handed alpha
Helix 4
AA4
A
76 78Right-handed 310
Helix 5
AA5
A
79 106Right-handed alpha
Helix 6
AA6
A
111 117Right-handed alpha
Helix 7
AA7
A
122 152Right-handed alpha
Helix 8
AA8
A
173 177Right-handed 310
Helix 9
AA9
A
193 202Right-handed alpha
Helix 10
AB1
A
217 237Right-handed alpha
Helix 11
AB2
A
244 267Right-handed alpha
Helix 12
AB3
A
269 279Right-handed alpha
Helix 13
AB4
A
282 286Right-handed 310
Helix 14
AB5
A
287 302Right-handed alpha
Helix 15
AB6
A
307 314Right-handed alpha
Helix 16
AB7
A
321 356Right-handed alpha
Helix 17
AB8
A
358 362Right-handed 310
Helix 18
AB9
A
369 381Right-handed alpha
Helix 19
AC1
A
383 418Right-handed alpha
Helix 20
AC2
A
425 444Right-handed alpha
Helix 21
AC3
A
445 447Right-handed 310
Helix 22
AC4
A
450 462Right-handed alpha
Helix 23
AC5
A
465 482Right-handed alpha
Helix 24
AC6
A
484 497Right-handed alpha
Helix 25
AC7
A
504 510Right-handed alpha
Helix 26
AC8
A
510 526Right-handed alpha
Helix 27
AC9
A
531 535Right-handed 310
Helix 28
AD1
A
539 555Right-handed alpha
Helix 29
AD2
A
555 567Right-handed alpha
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There are no sheets in PDB entry 9JCZ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il