Analysis of interatomic Contacts of Structural Units in PDB entry:
9JDR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JDR entry

There is 1 chain in PDB entry 9JDR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 48PRO 469
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 9JDR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 52Right-handed 310
Helix 2
AA2
A
53 58Right-handed alpha
Helix 3
AA3
A
62 75Right-handed alpha
Helix 4
AA4
A
80 93Right-handed alpha
Helix 5
AA5
A
95 109Right-handed alpha
Helix 6
AA6
A
121 126Right-handed alpha
Helix 7
AA7
A
126 131Right-handed alpha
Helix 8
AA8
A
132 144Right-handed alpha
Helix 9
AA9
A
144 149Right-handed alpha
Helix 10
AB1
A
150 157Right-handed alpha
Helix 11
AB2
A
170 178Right-handed alpha
Helix 12
AB3
A
180 184Right-handed 310
Helix 13
AB4
A
195 203Right-handed alpha
Helix 14
AB5
A
206 218Right-handed alpha
Helix 15
AB6
A
231 236Right-handed alpha
Helix 16
AB7
A
240 246Right-handed alpha
Helix 17
AB8
A
249 257Right-handed alpha
Helix 18
AB9
A
264 269Right-handed alpha
Helix 19
AC1
A
270 272Right-handed 310
Helix 20
AC2
A
275 285Right-handed alpha
Helix 21
AC3
A
286 292Right-handed alpha
Helix 22
AC4
A
293 297Right-handed 310
Helix 23
AC5
A
308 329Right-handed alpha
Helix 24
AC6
A
330 341Right-handed alpha
Helix 25
AC7
A
350 355Right-handed alpha
Helix 26
AC8
A
356 365Right-handed alpha
Helix 27
AC9
A
365 370Right-handed alpha
Helix 28
AD1
A
375 384Right-handed alpha
Helix 29
AD2
A
384 389Right-handed alpha
Helix 30
AD3
A
391 400Right-handed alpha
Helix 31
AD4
A
422 427Right-handed alpha
Helix 32
AD5
A
427 436Right-handed alpha
Helix 33
AD6
A
442 459Right-handed alpha
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There are no sheets in PDB entry 9JDR
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