Analysis of interatomic Contacts of Structural Units in PDB entry:
9JGC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JGC entry

There is 1 chain in PDB entry 9JGC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2PHE 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 9JGC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 24Right-handed 310
Helix 2
AA2
A
26 37Right-handed alpha
Helix 3
AA3
A
39 43Right-handed 310
Helix 4
AA4
A
46 55Right-handed alpha
Helix 5
AA5
A
65 78Right-handed alpha
Helix 6
AA6
A
79 84Right-handed alpha
Helix 7
AA7
A
110 125Right-handed alpha
Helix 8
AA8
A
140 149Right-handed alpha
Helix 9
AA9
A
164 173Right-handed alpha
Helix 10
AB1
A
207 224Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9JGC.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
134 138anti-parallel
Strand 3
A
97 101anti-parallel
Strand 4
A
87 93anti-parallel
Strand 5
A
7 14parallel
Strand 6
A
179 183parallel
Strand 7
A
153 156parallel
Strand 8
A
197 200parallel
Strand 9
A
161 162parallel
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