Analysis of interatomic Contacts of Structural Units in PDB entry:
9JH7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JH7 entry

There are 2 chains in PDB entry 9JH7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 7LEU 751
C
 T 1 G 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9JH7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 55Right-handed alpha
Helix 2
AA2
A
97 114Right-handed alpha
Helix 3
AA3
A
187 194Right-handed alpha
Helix 4
AA4
A
235 240Right-handed alpha
Helix 5
AA5
A
241 248Right-handed 310
Helix 6
AA6
A
252 256Right-handed 310
Helix 7
AA7
A
281 289Right-handed alpha
Helix 8
AA8
A
289 301Right-handed alpha
Helix 9
AA9
A
303 319Right-handed alpha
Helix 10
AB1
A
364 369Right-handed alpha
Helix 11
AB2
A
388 405Right-handed alpha
Helix 12
AB3
A
439 453Right-handed alpha
Helix 13
AB4
A
474 485Right-handed alpha
Helix 14
AB5
A
494 502Right-handed alpha
Helix 15
AB6
A
506 523Right-handed alpha
Helix 16
AB7
A
584 602Right-handed alpha
Helix 17
AB8
A
620 631Right-handed alpha
Helix 18
AB9
A
698 712Right-handed alpha
Helix 19
AC1
A
723 735Right-handed alpha
Helix 20
AC2
A
736 739Right-handed 310
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There are 11 sheets in PDB entry 9JH7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
648 651anti-parallel
Strand 3
A
656 657anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 16first strand
Strand 2
A
172 183anti-parallel
Strand 3
A
153 166anti-parallel
Strand 4
A
132 135anti-parallel
Strand 5
A
125 127anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 16first strand
Strand 2
A
172 183anti-parallel
Strand 3
A
153 166anti-parallel
Strand 4
A
148 150anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
90 91anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
29 33anti-parallel
Strand 3
A
82 85anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 271first strand
Strand 2
A
260 263anti-parallel
Strand 3
A
214 219anti-parallel
Strand 4
A
202 205anti-parallel
Strand 5
A
276 278anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 321first strand
Strand 2
A
327 328anti-parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 346first strand
Strand 2
A
663 667anti-parallel
Strand 3
A
670 674anti-parallel
Strand 4
A
688 694anti-parallel
Strand 5
A
634 641anti-parallel
Strand 6
A
608 613parallel
Strand 7
A
539 543parallel
Strand 8
A
557 560anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 353first strand
Strand 2
A
529 530anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 435first strand
Strand 2
A
382 385parallel
Strand 3
A
460 463parallel
Strand 4
A
492 493parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 571first strand
Strand 2
A
744 745anti-parallel
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