Analysis of interatomic Contacts of Structural Units in PDB entry:
9JKH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JKH entry

There is 1 chain in PDB entry 9JKH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 67VAL 620
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9JKH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
69 74Right-handed alpha
Helix 2
AA2
A
85 93Right-handed alpha
Helix 3
AA3
A
101 110Right-handed alpha
Helix 4
AA4
A
110 125Right-handed alpha
Helix 5
AA5
A
130 138Right-handed 310
Helix 6
AA6
A
139 168Right-handed alpha
Helix 7
AA7
A
211 219Right-handed alpha
Helix 8
AA8
A
223 227Right-handed 310
Helix 9
AA9
A
244 253Right-handed alpha
Helix 10
AB1
A
272 287Right-handed alpha
Helix 11
AB2
A
292 296Right-handed 310
Helix 12
AB3
A
308 323Right-handed alpha
Helix 13
AB4
A
327 335Right-handed alpha
Helix 14
AB5
A
341 375Right-handed alpha
Helix 15
AB6
A
378 382Right-handed 310
Helix 16
AB7
A
389 399Right-handed alpha
Helix 17
AB8
A
403 425Right-handed alpha
Helix 18
AB9
A
427 436Right-handed alpha
Helix 19
AC1
A
439 443Right-handed 310
Helix 20
AC2
A
447 459Right-handed alpha
Helix 21
AC3
A
468 478Right-handed alpha
Helix 22
AC4
A
481 493Right-handed alpha
Helix 23
AC5
A
500 513Right-handed alpha
Helix 24
AC6
A
527 532Right-handed alpha
Helix 25
AC7
A
532 542Right-handed alpha
Helix 26
AC8
A
554 560Right-handed alpha
Helix 27
AC9
A
564 568Right-handed 310
Helix 28
AD1
A
571 579Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9JKH.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 548first strand
Strand 2
A
551 552anti-parallel
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