Analysis of interatomic Contacts of Structural Units in PDB entry:
9JLV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JLV entry

There is 1 chain in PDB entry 9JLV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 477
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9JLV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 37Right-handed alpha
Helix 2
AA2
A
39 44Right-handed alpha
Helix 3
AA3
A
45 47Right-handed 310
Helix 4
AA4
A
57 69Right-handed alpha
Helix 5
AA5
A
75 82Right-handed alpha
Helix 6
AA6
A
83 87Right-handed 310
Helix 7
AA7
A
88 103Right-handed alpha
Helix 8
AA8
A
105 109Right-handed 310
Helix 9
AA9
A
110 118Right-handed alpha
Helix 10
AB1
A
123 138Right-handed alpha
Helix 11
AB2
A
140 147Right-handed alpha
Helix 12
AB3
A
147 154Right-handed alpha
Helix 13
AB4
A
158 175Right-handed alpha
Helix 14
AB5
A
175 186Right-handed alpha
Helix 15
AB6
A
200 206Right-handed alpha
Helix 16
AB7
A
207 213Right-handed 310
Helix 17
AB8
A
226 246Right-handed alpha
Helix 18
AB9
A
254 258Right-handed 310
Helix 19
AC1
A
260 270Right-handed alpha
Helix 20
AC2
A
278 286Right-handed alpha
Helix 21
AC3
A
307 317Right-handed alpha
Helix 22
AC4
A
318 321Right-handed 310
Helix 23
AC5
A
322 341Right-handed alpha
Helix 24
AC6
A
356 363Right-handed 310
Helix 25
AC7
A
364 376Right-handed alpha
Helix 26
AC8
A
385 392Right-handed alpha
Helix 27
AC9
A
419 435Right-handed alpha
Helix 28
AD1
A
439 445Right-handed alpha
Helix 29
AD2
A
446 453Right-handed alpha
Helix 30
AD3
A
460 476Right-handed alpha
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There are 4 sheets in PDB entry 9JLV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
53 56parallel
Strand 3
A
4 12parallel
Strand 4
A
346 352parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
53 56parallel
Strand 3
A
4 12parallel
Strand 4
A
381 383parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
73 74parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 252first strand
Strand 2
A
274 277parallel
Strand 3
A
301 305parallel
Strand 4
A
294 297anti-parallel
Strand 5
A
397 400parallel
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