Analysis of interatomic Contacts of Structural Units in PDB entry:
9JS7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9JS7 entry

There are 7 chains in PDB entry 9JS7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ILE 1	ALA 504
I	GLU 1	THR 121
L	SER 2	VAL 111
J	GLU 1	THR 121
M	SER 2	VAL 111
A	ILE 1	ALA 504
C	ILE 1	ALA 504

There are 32 helices in PDB entry 9JS7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	197	199	Right-handed 310
Helix 2	AA2	B	215	221	Right-handed alpha
Helix 3	AA3	B	238	241	Right-handed 310
Helix 4	AA4	B	261	269	Right-handed alpha
Helix 5	AA5	B	405	425	Right-handed alpha
Helix 6	AA6	B	426	431	Right-handed 310
Helix 7	AA7	B	437	458	Right-handed alpha
Helix 8	AA8	B	461	478	Right-handed alpha
Helix 9	AA9	B	481	504	Right-handed alpha
Helix 10	AB1	I	28	32	Right-handed 310
Helix 11	AB2	I	87	91	Right-handed 310
Helix 12	AB3	J	28	32	Right-handed 310
Helix 13	AB4	J	87	91	Right-handed 310
Helix 14	AB5	M	81	85	Right-handed 310
Helix 15	AB6	A	197	199	Right-handed 310
Helix 16	AB7	A	215	221	Right-handed alpha
Helix 17	AB8	A	238	241	Right-handed 310
Helix 18	AB9	A	261	269	Right-handed alpha
Helix 19	AC1	A	405	425	Right-handed alpha
Helix 20	AC2	A	426	431	Right-handed 310
Helix 21	AC3	A	436	458	Right-handed alpha
Helix 22	AC4	A	461	478	Right-handed alpha
Helix 23	AC5	A	482	504	Right-handed alpha
Helix 24	AC6	C	197	199	Right-handed 310
Helix 25	AC7	C	215	220	Right-handed alpha
Helix 26	AC8	C	238	241	Right-handed 310
Helix 27	AC9	C	261	269	Right-handed alpha
Helix 28	AD1	C	405	425	Right-handed alpha
Helix 29	AD2	C	426	431	Right-handed 310
Helix 30	AD3	C	436	458	Right-handed alpha
Helix 31	AD4	C	461	478	Right-handed alpha
Helix 32	AD5	C	481	504	Right-handed alpha

There are 43 sheets in PDB entry 9JS7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	13	first strand
Strand 2	B	30	34	parallel
Strand 3	B	41	50	anti-parallel
Strand 4	B	135	143	anti-parallel
Strand 5	B	164	169	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	13	first strand
Strand 2	B	30	34	parallel
Strand 3	B	41	50	anti-parallel
Strand 4	B	282	284	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	26	first strand
Strand 2	B	288	294	anti-parallel
Strand 3	B	185	191	anti-parallel
Strand 4	B	177	179	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	130	first strand
Strand 2	B	53	60	anti-parallel
Strand 3	B	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	73	first strand
Strand 2	B	111	121	anti-parallel
Strand 3	B	90	97	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	205	first strand
Strand 2	B	210	214	anti-parallel
Strand 3	B	273	275	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	246	first strand
Strand 2	B	254	257	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	312	314	first strand
Strand 2	B	326	332	anti-parallel
Strand 3	B	319	320	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	312	314	first strand
Strand 2	B	326	332	anti-parallel
Strand 3	B	372	379	anti-parallel
Strand 4	B	357	358	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	340	first strand
Strand 2	B	364	365	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	343	346	first strand
Strand 2	B	383	389	anti-parallel
Strand 3	B	396	402	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	7	first strand
Strand 2	I	18	25	anti-parallel
Strand 3	I	78	83	anti-parallel
Strand 4	I	69	73	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	58	60	first strand
Strand 2	I	46	51	anti-parallel
Strand 3	I	33	39	anti-parallel
Strand 4	I	92	99	anti-parallel
Strand 5	I	111	114	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	58	60	first strand
Strand 2	I	46	51	anti-parallel
Strand 3	I	33	39	anti-parallel
Strand 4	I	92	99	anti-parallel
Strand 5	I	118	120	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	106	110	parallel
Strand 3	L	86	93	anti-parallel
Strand 4	L	35	40	anti-parallel
Strand 5	L	47	50	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	106	110	parallel
Strand 3	L	86	93	anti-parallel
Strand 4	L	100	102	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	18	23	first strand
Strand 2	L	72	77	anti-parallel
Strand 3	L	64	69	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	3	7	first strand
Strand 2	J	18	25	anti-parallel
Strand 3	J	78	83	anti-parallel
Strand 4	J	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	11	first strand
Strand 2	J	118	121	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	33	39	anti-parallel
Strand 5	J	46	51	anti-parallel
Strand 6	J	58	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	11	first strand
Strand 2	J	118	121	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	111	114	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	9	12	first strand
Strand 2	M	106	110	parallel
Strand 3	M	86	93	anti-parallel
Strand 4	M	35	40	anti-parallel
Strand 5	M	47	50	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	9	12	first strand
Strand 2	M	106	110	parallel
Strand 3	M	86	93	anti-parallel
Strand 4	M	100	102	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	18	23	first strand
Strand 2	M	72	77	anti-parallel
Strand 3	M	64	69	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	13	first strand
Strand 2	A	30	34	parallel
Strand 3	A	41	50	anti-parallel
Strand 4	A	135	143	anti-parallel
Strand 5	A	164	169	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	26	first strand
Strand 2	A	288	294	anti-parallel
Strand 3	A	184	190	anti-parallel
Strand 4	A	177	180	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	225	227	first strand
Strand 2	A	54	60	anti-parallel
Strand 3	A	124	129	anti-parallel
Strand 4	A	201	205	anti-parallel
Strand 5	A	210	214	anti-parallel
Strand 6	A	273	275	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	65	first strand
Strand 2	A	111	121	anti-parallel
Strand 3	A	69	73	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	65	first strand
Strand 2	A	111	121	anti-parallel
Strand 3	A	90	97	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	246	first strand
Strand 2	A	254	257	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	321	first strand
Strand 2	A	325	332	anti-parallel
Strand 3	A	372	375	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	340	first strand
Strand 2	A	364	365	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	346	first strand
Strand 2	A	383	389	anti-parallel
Strand 3	A	396	402	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	358	first strand
Strand 2	A	378	379	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	13	first strand
Strand 2	C	31	34	parallel
Strand 3	C	41	50	anti-parallel
Strand 4	C	135	143	anti-parallel
Strand 5	C	164	169	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	26	first strand
Strand 2	C	288	294	anti-parallel
Strand 3	C	184	191	anti-parallel
Strand 4	C	177	180	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	124	130	first strand
Strand 2	C	53	60	anti-parallel
Strand 3	C	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	73	first strand
Strand 2	C	111	121	anti-parallel
Strand 3	C	90	97	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	201	205	first strand
Strand 2	C	210	214	anti-parallel
Strand 3	C	273	275	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	243	246	first strand
Strand 2	C	254	257	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	312	314	first strand
Strand 2	C	325	332	anti-parallel
Strand 3	C	319	321	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	312	314	first strand
Strand 2	C	325	332	anti-parallel
Strand 3	C	372	379	anti-parallel
Strand 4	C	357	358	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	340	first strand
Strand 2	C	364	365	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	343	346	first strand
Strand 2	C	383	389	anti-parallel
Strand 3	C	396	402	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9JS7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9JS7