Analysis of interatomic Contacts of Structural Units in PDB entry:
9JSL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9JSL entry

There are 7 chains in PDB entry 9JSL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 216	ASN 741
B	GLU 216	SER 742
C	GLU 216	SER 742
D	GLU 216	SER 742
E	GLU 216	LEU 747
F	GLU 216	ILE 746
G	GLU 216	ILE 746

There are 75 helices in PDB entry 9JSL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	226	232	Right-handed alpha
Helix 2	AA2	A	245	250	Right-handed 310
Helix 3	AA3	A	271	277	Right-handed alpha
Helix 4	AA4	A	285	289	Right-handed 310
Helix 5	AA5	A	462	471	Right-handed alpha
Helix 6	AA6	A	502	511	Right-handed alpha
Helix 7	AA7	A	545	555	Right-handed alpha
Helix 8	AA8	A	580	592	Right-handed alpha
Helix 9	AA9	A	598	602	Right-handed 310
Helix 10	AB1	B	226	232	Right-handed alpha
Helix 11	AB2	B	245	252	Right-handed 310
Helix 12	AB3	B	271	278	Right-handed alpha
Helix 13	AB4	B	285	290	Right-handed 310
Helix 14	AB5	B	463	471	Right-handed alpha
Helix 15	AB6	B	501	504	Right-handed 310
Helix 16	AB7	B	505	512	Right-handed alpha
Helix 17	AB8	B	545	555	Right-handed alpha
Helix 18	AB9	B	571	575	Right-handed 310
Helix 19	AC1	B	580	592	Right-handed alpha
Helix 20	AC2	B	598	602	Right-handed 310
Helix 21	AC3	B	658	662	Right-handed 310
Helix 22	AC4	C	226	232	Right-handed alpha
Helix 23	AC5	C	271	278	Right-handed alpha
Helix 24	AC6	C	285	289	Right-handed 310
Helix 25	AC7	C	463	471	Right-handed alpha
Helix 26	AC8	C	501	504	Right-handed 310
Helix 27	AC9	C	505	511	Right-handed alpha
Helix 28	AD1	C	545	555	Right-handed alpha
Helix 29	AD2	C	571	575	Right-handed 310
Helix 30	AD3	C	580	592	Right-handed alpha
Helix 31	AD4	C	598	602	Right-handed 310
Helix 32	AD5	D	226	232	Right-handed alpha
Helix 33	AD6	D	245	252	Right-handed 310
Helix 34	AD7	D	271	277	Right-handed alpha
Helix 35	AD8	D	463	471	Right-handed alpha
Helix 36	AD9	D	502	511	Right-handed alpha
Helix 37	AE1	D	545	555	Right-handed alpha
Helix 38	AE2	D	580	592	Right-handed alpha
Helix 39	AE3	D	598	602	Right-handed 310
Helix 40	AE4	D	658	662	Right-handed 310
Helix 41	AE5	E	226	233	Right-handed alpha
Helix 42	AE6	E	245	249	Right-handed 310
Helix 43	AE7	E	271	278	Right-handed alpha
Helix 44	AE8	E	285	289	Right-handed 310
Helix 45	AE9	E	331	337	Right-handed alpha
Helix 46	AF1	E	462	471	Right-handed alpha
Helix 47	AF2	E	502	511	Right-handed alpha
Helix 48	AF3	E	545	555	Right-handed alpha
Helix 49	AF4	E	580	591	Right-handed alpha
Helix 50	AF5	E	598	602	Right-handed 310
Helix 51	AF6	E	658	662	Right-handed 310
Helix 52	AF7	F	226	233	Right-handed alpha
Helix 53	AF8	F	245	252	Right-handed 310
Helix 54	AF9	F	271	278	Right-handed alpha
Helix 55	AG1	F	285	289	Right-handed 310
Helix 56	AG2	F	331	337	Right-handed alpha
Helix 57	AG3	F	413	416	Right-handed 310
Helix 58	AG4	F	462	471	Right-handed alpha
Helix 59	AG5	F	501	505	Right-handed 310
Helix 60	AG6	F	545	555	Right-handed alpha
Helix 61	AG7	F	580	592	Right-handed alpha
Helix 62	AG8	F	598	602	Right-handed 310
Helix 63	AG9	F	658	662	Right-handed 310
Helix 64	AH1	G	226	233	Right-handed alpha
Helix 65	AH2	G	245	249	Right-handed 310
Helix 66	AH3	G	271	277	Right-handed alpha
Helix 67	AH4	G	285	290	Right-handed 310
Helix 68	AH5	G	374	379	Right-handed alpha
Helix 69	AH6	G	462	472	Right-handed alpha
Helix 70	AH7	G	501	504	Right-handed 310
Helix 71	AH8	G	505	510	Right-handed alpha
Helix 72	AH9	G	545	555	Right-handed alpha
Helix 73	AI1	G	580	592	Right-handed alpha
Helix 74	AI2	G	598	602	Right-handed 310
Helix 75	AI3	G	658	662	Right-handed 310

There are 64 sheets in PDB entry 9JSL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9, AH1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	237	first strand
Strand 2	A	240	243	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	299	309	first strand
Strand 2	A	387	396	anti-parallel
Strand 3	A	446	448	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	417	422	first strand
Strand 2	A	408	412	anti-parallel
Strand 3	A	476	481	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	488	489	first strand
Strand 2	A	495	496	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	524	530	first strand
Strand 2	A	513	519	anti-parallel
Strand 3	A	609	613	parallel
Strand 4	A	576	579	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	557	558	first strand
Strand 2	A	563	564	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	617	619	first strand
Strand 2	A	721	739	anti-parallel
Strand 3	A	683	687	anti-parallel
Strand 4	A	693	697	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	647	656	first strand
Strand 2	A	721	739	anti-parallel
Strand 3	A	666	675	anti-parallel
Strand 4	A	704	712	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	236	first strand
Strand 2	B	241	243	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	299	309	first strand
Strand 2	B	387	396	anti-parallel
Strand 3	B	446	448	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	417	422	first strand
Strand 2	B	402	412	anti-parallel
Strand 3	B	429	432	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	417	422	first strand
Strand 2	B	402	412	anti-parallel
Strand 3	B	478	485	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	488	489	first strand
Strand 2	B	495	496	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	524	530	first strand
Strand 2	B	513	519	anti-parallel
Strand 3	B	609	613	parallel
Strand 4	B	576	579	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	557	559	first strand
Strand 2	B	562	564	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	617	619	first strand
Strand 2	B	721	740	anti-parallel
Strand 3	B	683	687	anti-parallel
Strand 4	B	693	697	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	647	656	first strand
Strand 2	B	721	740	anti-parallel
Strand 3	B	666	675	anti-parallel
Strand 4	B	704	712	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	234	237	first strand
Strand 2	C	240	243	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	299	309	first strand
Strand 2	C	387	396	anti-parallel
Strand 3	C	437	438	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	299	309	first strand
Strand 2	C	387	396	anti-parallel
Strand 3	C	446	448	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	417	422	first strand
Strand 2	C	403	412	anti-parallel
Strand 3	C	476	485	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	488	489	first strand
Strand 2	C	495	496	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	524	530	first strand
Strand 2	C	513	519	anti-parallel
Strand 3	C	609	613	parallel
Strand 4	C	576	579	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	557	559	first strand
Strand 2	C	562	564	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	617	619	first strand
Strand 2	C	721	739	anti-parallel
Strand 3	C	683	687	anti-parallel
Strand 4	C	693	697	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	647	656	first strand
Strand 2	C	721	739	anti-parallel
Strand 3	C	666	675	anti-parallel
Strand 4	C	704	712	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	234	237	first strand
Strand 2	D	240	243	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	299	307	first strand
Strand 2	D	389	396	anti-parallel
Strand 3	D	446	448	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	417	422	first strand
Strand 2	D	403	412	anti-parallel
Strand 3	D	476	485	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	488	489	first strand
Strand 2	D	495	496	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	530	first strand
Strand 2	D	513	519	anti-parallel
Strand 3	D	609	613	parallel
Strand 4	D	576	579	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	557	559	first strand
Strand 2	D	562	564	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	617	619	first strand
Strand 2	D	720	740	anti-parallel
Strand 3	D	683	687	anti-parallel
Strand 4	D	693	697	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	647	657	first strand
Strand 2	D	720	740	anti-parallel
Strand 3	D	667	675	anti-parallel
Strand 4	D	703	709	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	234	237	first strand
Strand 2	E	240	243	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	299	303	first strand
Strand 2	E	392	396	anti-parallel
Strand 3	E	437	438	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	327	329	first strand
Strand 2	E	363	365	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	351	352	first strand
Strand 2	E	576	579	parallel
Strand 3	E	609	613	anti-parallel
Strand 4	E	513	519	parallel
Strand 5	E	524	530	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	420	422	first strand
Strand 2	E	402	412	anti-parallel
Strand 3	E	429	432	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	420	422	first strand
Strand 2	E	402	412	anti-parallel
Strand 3	E	476	485	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	488	489	first strand
Strand 2	E	495	496	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	557	559	first strand
Strand 2	E	562	565	anti-parallel
Strand 3	E	568	569	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	617	619	first strand
Strand 2	E	730	742	anti-parallel
Strand 3	E	647	649	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	617	619	first strand
Strand 2	E	730	742	anti-parallel
Strand 3	E	666	675	anti-parallel
Strand 4	E	704	711	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	652	657	first strand
Strand 2	E	720	726	anti-parallel
Strand 3	E	683	688	anti-parallel
Strand 4	E	692	697	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	234	237	first strand
Strand 2	F	240	243	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	299	303	first strand
Strand 2	F	391	396	anti-parallel
Strand 3	F	437	438	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	299	303	first strand
Strand 2	F	391	396	anti-parallel
Strand 3	F	446	447	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	326	329	first strand
Strand 2	F	363	366	anti-parallel

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There are 5 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	351	352	first strand
Strand 2	F	576	579	parallel
Strand 3	F	609	613	anti-parallel
Strand 4	F	513	519	parallel
Strand 5	F	524	530	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	420	422	first strand
Strand 2	F	403	411	anti-parallel
Strand 3	F	477	485	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	488	489	first strand
Strand 2	F	495	496	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	617	619	first strand
Strand 2	F	720	742	anti-parallel
Strand 3	F	683	687	anti-parallel
Strand 4	F	693	697	anti-parallel

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There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	647	657	first strand
Strand 2	F	720	742	anti-parallel
Strand 3	F	666	675	anti-parallel
Strand 4	F	704	710	anti-parallel

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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	234	237	first strand
Strand 2	G	240	243	anti-parallel

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There are 3 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	299	301	first strand
Strand 2	G	394	396	anti-parallel
Strand 3	G	437	438	anti-parallel

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There are 3 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	305	306	first strand
Strand 2	G	390	392	anti-parallel
Strand 3	G	446	448	anti-parallel

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There are 2 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	326	329	first strand
Strand 2	G	363	366	anti-parallel

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There are 2 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	403	411	first strand
Strand 2	G	477	485	anti-parallel

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There are 2 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	488	489	first strand
Strand 2	G	495	496	anti-parallel

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There are 4 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	524	530	first strand
Strand 2	G	513	519	anti-parallel
Strand 3	G	609	613	parallel
Strand 4	G	576	578	anti-parallel

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There are 3 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	617	619	first strand
Strand 2	G	730	739	anti-parallel
Strand 3	G	647	649	anti-parallel

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There are 4 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	617	619	first strand
Strand 2	G	730	739	anti-parallel
Strand 3	G	667	675	anti-parallel
Strand 4	G	704	711	anti-parallel

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There are 4 strands in AH1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	652	657	first strand
Strand 2	G	720	726	anti-parallel
Strand 3	G	683	688	anti-parallel
Strand 4	G	693	697	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 9JSL

Analysis of interatomic Contacts of Structural Units in PDB entry:
9JSL