Analysis of interatomic Contacts of Structural Units in PDB entry:
9JTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JTE entry

There are 3 chains in PDB entry 9JTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 19TRP 610
B
 PRO 19ASP 609
E
 THR 333ASN 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 9JTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 53Right-handed alpha
Helix 2
AA2
A
55 83Right-handed alpha
Helix 3
AA3
A
84 88Right-handed 310
Helix 4
AA4
A
90 101Right-handed alpha
Helix 5
AA5
A
104 108Right-handed 310
Helix 6
AA6
A
109 130Right-handed alpha
Helix 7
AA7
A
147 155Right-handed alpha
Helix 8
AA8
A
157 194Right-handed alpha
Helix 9
AA9
A
198 205Right-handed alpha
Helix 10
AB1
A
206 208Right-handed 310
Helix 11
AB2
A
219 252Right-handed alpha
Helix 12
AB3
A
265 267Right-handed 310
Helix 13
AB4
A
274 277Right-handed 310
Helix 14
AB5
A
278 283Right-handed alpha
Helix 15
AB6
A
293 300Right-handed alpha
Helix 16
AB7
A
303 319Right-handed alpha
Helix 17
AB8
A
324 331Right-handed alpha
Helix 18
AB9
A
365 385Right-handed alpha
Helix 19
AC1
A
389 393Right-handed 310
Helix 20
AC2
A
399 414Right-handed alpha
Helix 21
AC3
A
414 421Right-handed alpha
Helix 22
AC4
A
431 448Right-handed alpha
Helix 23
AC5
A
448 466Right-handed alpha
Helix 24
AC6
A
469 471Right-handed 310
Helix 25
AC7
A
472 484Right-handed alpha
Helix 26
AC8
A
498 502Right-handed 310
Helix 27
AC9
A
503 508Right-handed alpha
Helix 28
AD1
A
513 533Right-handed alpha
Helix 29
AD2
A
538 542Right-handed 310
Helix 30
AD3
A
547 559Right-handed alpha
Helix 31
AD4
A
565 574Right-handed alpha
Helix 32
AD5
A
581 600Right-handed alpha
Helix 33
AD6
B
20 53Right-handed alpha
Helix 34
AD7
B
55 83Right-handed alpha
Helix 35
AD8
B
84 88Right-handed 310
Helix 36
AD9
B
90 101Right-handed alpha
Helix 37
AE1
B
109 130Right-handed alpha
Helix 38
AE2
B
147 155Right-handed alpha
Helix 39
AE3
B
157 194Right-handed alpha
Helix 40
AE4
B
198 205Right-handed alpha
Helix 41
AE5
B
206 208Right-handed 310
Helix 42
AE6
B
218 252Right-handed alpha
Helix 43
AE7
B
265 267Right-handed 310
Helix 44
AE8
B
275 277Right-handed 310
Helix 45
AE9
B
278 283Right-handed alpha
Helix 46
AF1
B
293 300Right-handed alpha
Helix 47
AF2
B
303 318Right-handed alpha
Helix 48
AF3
B
324 331Right-handed alpha
Helix 49
AF4
B
365 385Right-handed alpha
Helix 50
AF5
B
389 393Right-handed 310
Helix 51
AF6
B
400 414Right-handed alpha
Helix 52
AF7
B
414 422Right-handed alpha
Helix 53
AF8
B
431 446Right-handed alpha
Helix 54
AF9
B
448 466Right-handed alpha
Helix 55
AG1
B
469 471Right-handed 310
Helix 56
AG2
B
472 484Right-handed alpha
Helix 57
AG3
B
498 502Right-handed 310
Helix 58
AG4
B
503 508Right-handed alpha
Helix 59
AG5
B
512 533Right-handed alpha
Helix 60
AG6
B
538 542Right-handed 310
Helix 61
AG7
B
547 559Right-handed alpha
Helix 62
AG8
B
565 574Right-handed alpha
Helix 63
AG9
B
581 588Right-handed alpha
Helix 64
AH1
B
588 599Right-handed alpha
Helix 65
AH2
E
337 343Right-handed alpha
Helix 66
AH3
E
349 353Right-handed 310
Helix 67
AH4
E
365 372Right-handed alpha
Helix 68
AH5
E
405 410Right-handed 310
Helix 69
AH6
E
416 422Right-handed alpha
Helix 70
AH7
E
438 443Right-handed alpha
Helix 71
AH8
E
502 505Right-handed 310
Helix 72
AH9
C
337 342Right-handed alpha
Helix 73
AI1
C
349 353Right-handed 310
Helix 74
AI2
C
365 372Right-handed alpha
Helix 75
AI3
C
383 388Right-handed alpha
Helix 76
AI4
C
404 408Right-handed alpha
Helix 77
AI5
C
409 411Right-handed 310
Helix 78
AI6
C
416 422Right-handed alpha
Helix 79
AI7
C
502 505Right-handed 310
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There are 14 sheets in PDB entry 9JTE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
142 143anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 350first strand
Strand 2
A
356 359anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 133first strand
Strand 2
B
141 143anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
487 488parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 350first strand
Strand 2
B
356 359anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
354 358first strand
Strand 2
E
395 403anti-parallel
Strand 3
E
507 515anti-parallel
Strand 4
E
432 437anti-parallel
Strand 5
E
376 378anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
361 362first strand
Strand 2
E
524 525parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
452 453first strand
Strand 2
E
493 494anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
473 474first strand
Strand 2
E
488 489anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
354 358first strand
Strand 2
C
395 403anti-parallel
Strand 3
C
507 515anti-parallel
Strand 4
C
431 437anti-parallel
Strand 5
C
376 379anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
361 362first strand
Strand 2
C
524 525parallel
Strand 3
C
391 392anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
452 454first strand
Strand 2
C
492 494anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
473 474first strand
Strand 2
C
488 489anti-parallel
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