Analysis of interatomic Contacts of Structural Units in PDB entry:
9JTR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JTR entry

There are 2 chains in PDB entry 9JTR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 79SER 321
B
 ASP 79SER 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 9JTR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
79 83Right-handed 310
Helix 2
AA2
A
85 93Right-handed alpha
Helix 3
AA3
A
108 117Right-handed alpha
Helix 4
AA4
A
127 146Right-handed alpha
Helix 5
AA5
A
156 160Right-handed 310
Helix 6
AA6
A
199 211Right-handed alpha
Helix 7
AA7
A
219 224Right-handed alpha
Helix 8
AA8
A
224 238Right-handed alpha
Helix 9
AA9
A
245 251Right-handed alpha
Helix 10
AB1
A
257 263Right-handed alpha
Helix 11
AB2
A
268 282Right-handed alpha
Helix 12
AB3
A
287 305Right-handed alpha
Helix 13
AB4
B
79 83Right-handed 310
Helix 14
AB5
B
85 93Right-handed alpha
Helix 15
AB6
B
108 117Right-handed alpha
Helix 16
AB7
B
127 146Right-handed alpha
Helix 17
AB8
B
156 160Right-handed 310
Helix 18
AB9
B
199 211Right-handed alpha
Helix 19
AC1
B
219 224Right-handed alpha
Helix 20
AC2
B
224 238Right-handed alpha
Helix 21
AC3
B
245 251Right-handed alpha
Helix 22
AC4
B
257 264Right-handed alpha
Helix 23
AC5
B
268 282Right-handed alpha
Helix 24
AC6
B
287 304Right-handed alpha
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There are no sheets in PDB entry 9JTR
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