Analysis of interatomic Contacts of Structural Units in PDB entry:
9JW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JW2 entry

There is 1 chain in PDB entry 9JW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 6PHE 491
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9JW2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 67Right-handed alpha
Helix 2
AA2
A
69 87Right-handed alpha
Helix 3
AA3
A
87 100Right-handed alpha
Helix 4
AA4
A
102 121Right-handed alpha
Helix 5
AA5
A
161 174Right-handed alpha
Helix 6
AA6
A
191 200Right-handed alpha
Helix 7
AA7
A
214 225Right-handed alpha
Helix 8
AA8
A
236 248Right-handed alpha
Helix 9
AA9
A
273 287Right-handed alpha
Helix 10
AB1
A
288 291Right-handed 310
Helix 11
AB2
A
303 319Right-handed alpha
Helix 12
AB3
A
337 354Right-handed alpha
Helix 13
AB4
A
381 386Right-handed alpha
Helix 14
AB5
A
400 410Right-handed alpha
Helix 15
AB6
A
423 433Right-handed alpha
Helix 16
AB7
A
457 459Right-handed 310
Helix 17
AB8
A
466 474Right-handed alpha
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There are 5 sheets in PDB entry 9JW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 16first strand
Strand 2
A
19 21anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
39 44anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
141 147anti-parallel
Strand 3
A
475 481anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 210first strand
Strand 2
A
177 181parallel
Strand 3
A
150 154parallel
Strand 4
A
228 234parallel
Strand 5
A
255 259parallel
Strand 6
A
461 462anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 360first strand
Strand 2
A
372 375anti-parallel
Strand 3
A
392 398parallel
Strand 4
A
298 302parallel
Strand 5
A
265 268parallel
Strand 6
A
418 420parallel
Strand 7
A
440 441parallel
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