Analysis of interatomic Contacts of Structural Units in PDB entry:
9JXD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JXD entry

There are 2 chains in PDB entry 9JXD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 230ALA 625
B
 PRO 230ALA 625
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9JXD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
231 257Right-handed alpha
Helix 2
AA2
A
265 270Right-handed alpha
Helix 3
AA3
A
271 296Right-handed alpha
Helix 4
AA4
A
298 303Right-handed alpha
Helix 5
AA5
A
312 336Right-handed alpha
Helix 6
AA6
A
345 358Right-handed alpha
Helix 7
AA7
A
367 383Right-handed alpha
Helix 8
AA8
A
384 387Right-handed 310
Helix 9
AA9
A
391 403Right-handed alpha
Helix 10
AB1
A
403 417Right-handed alpha
Helix 11
AB2
A
446 471Right-handed alpha
Helix 12
AB3
A
472 477Right-handed alpha
Helix 13
AB4
A
480 503Right-handed alpha
Helix 14
AB5
A
506 532Right-handed alpha
Helix 15
AB6
A
555 582Right-handed alpha
Helix 16
AB7
A
591 619Right-handed alpha
Helix 17
AB8
B
231 257Right-handed alpha
Helix 18
AB9
B
265 270Right-handed alpha
Helix 19
AC1
B
271 296Right-handed alpha
Helix 20
AC2
B
298 303Right-handed alpha
Helix 21
AC3
B
312 336Right-handed alpha
Helix 22
AC4
B
345 358Right-handed alpha
Helix 23
AC5
B
367 383Right-handed alpha
Helix 24
AC6
B
384 387Right-handed 310
Helix 25
AC7
B
391 403Right-handed alpha
Helix 26
AC8
B
403 417Right-handed alpha
Helix 27
AC9
B
446 471Right-handed alpha
Helix 28
AD1
B
472 477Right-handed alpha
Helix 29
AD2
B
480 503Right-handed alpha
Helix 30
AD3
B
506 532Right-handed alpha
Helix 31
AD4
B
555 582Right-handed alpha
Helix 32
AD5
B
591 619Right-handed alpha
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There are no sheets in PDB entry 9JXD
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