Analysis of interatomic Contacts of Structural Units in PDB entry:
9JXF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JXF entry

There are 2 chains in PDB entry 9JXF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 21ALA 625
B
 GLN 21ALA 625
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 9JXF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 36Right-handed alpha
Helix 2
AA2
A
51 98Right-handed alpha
Helix 3
AA3
A
122 168Right-handed alpha
Helix 4
AA4
A
170 180Right-handed alpha
Helix 5
AA5
A
183 188Right-handed alpha
Helix 6
AA6
A
189 206Right-handed alpha
Helix 7
AA7
A
230 258Right-handed alpha
Helix 8
AA8
A
265 270Right-handed alpha
Helix 9
AA9
A
274 296Right-handed alpha
Helix 10
AB1
A
298 304Right-handed alpha
Helix 11
AB2
A
312 336Right-handed alpha
Helix 12
AB3
A
343 345Right-handed 310
Helix 13
AB4
A
346 360Right-handed alpha
Helix 14
AB5
A
367 383Right-handed alpha
Helix 15
AB6
A
384 387Right-handed 310
Helix 16
AB7
A
390 403Right-handed alpha
Helix 17
AB8
A
403 420Right-handed alpha
Helix 18
AB9
A
447 469Right-handed alpha
Helix 19
AC1
A
476 503Right-handed alpha
Helix 20
AC2
A
506 532Right-handed alpha
Helix 21
AC3
A
555 580Right-handed alpha
Helix 22
AC4
A
587 618Right-handed alpha
Helix 23
AC5
B
22 35Right-handed alpha
Helix 24
AC6
B
49 99Right-handed alpha
Helix 25
AC7
B
122 168Right-handed alpha
Helix 26
AC8
B
170 180Right-handed alpha
Helix 27
AC9
B
183 188Right-handed alpha
Helix 28
AD1
B
189 206Right-handed alpha
Helix 29
AD2
B
231 258Right-handed alpha
Helix 30
AD3
B
265 270Right-handed alpha
Helix 31
AD4
B
274 296Right-handed alpha
Helix 32
AD5
B
298 303Right-handed alpha
Helix 33
AD6
B
306 310Right-handed 310
Helix 34
AD7
B
312 336Right-handed alpha
Helix 35
AD8
B
346 360Right-handed alpha
Helix 36
AD9
B
367 383Right-handed alpha
Helix 37
AE1
B
384 387Right-handed 310
Helix 38
AE2
B
390 403Right-handed alpha
Helix 39
AE3
B
403 420Right-handed alpha
Helix 40
AE4
B
446 471Right-handed alpha
Helix 41
AE5
B
475 503Right-handed alpha
Helix 42
AE6
B
506 518Right-handed alpha
Helix 43
AE7
B
521 532Right-handed alpha
Helix 44
AE8
B
555 581Right-handed alpha
Helix 45
AE9
B
588 618Right-handed alpha
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There are no sheets in PDB entry 9JXF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il