Analysis of interatomic Contacts of Structural Units in PDB entry:
9JXR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JXR entry

There are 2 chains in PDB entry 9JXR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 223PHE 606
B
 PRO 223PHE 606
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9JXR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
223 250Right-handed alpha
Helix 2
AA2
A
255 286Right-handed alpha
Helix 3
AA3
A
289 295Right-handed alpha
Helix 4
AA4
A
305 327Right-handed alpha
Helix 5
AA5
A
327 332Right-handed alpha
Helix 6
AA6
A
336 351Right-handed alpha
Helix 7
AA7
A
358 374Right-handed alpha
Helix 8
AA8
A
381 394Right-handed alpha
Helix 9
AA9
A
395 411Right-handed alpha
Helix 10
AB1
A
420 424Right-handed 310
Helix 11
AB2
A
431 454Right-handed alpha
Helix 12
AB3
A
457 483Right-handed alpha
Helix 13
AB4
A
494 517Right-handed alpha
Helix 14
AB5
A
540 556Right-handed alpha
Helix 15
AB6
A
556 567Right-handed alpha
Helix 16
AB7
A
572 606Right-handed alpha
Helix 17
AB8
B
224 250Right-handed alpha
Helix 18
AB9
B
255 286Right-handed alpha
Helix 19
AC1
B
289 295Right-handed alpha
Helix 20
AC2
B
305 327Right-handed alpha
Helix 21
AC3
B
327 332Right-handed alpha
Helix 22
AC4
B
336 351Right-handed alpha
Helix 23
AC5
B
358 374Right-handed alpha
Helix 24
AC6
B
381 394Right-handed alpha
Helix 25
AC7
B
395 411Right-handed alpha
Helix 26
AC8
B
420 424Right-handed 310
Helix 27
AC9
B
431 454Right-handed alpha
Helix 28
AD1
B
457 483Right-handed alpha
Helix 29
AD2
B
494 517Right-handed alpha
Helix 30
AD3
B
540 556Right-handed alpha
Helix 31
AD4
B
556 567Right-handed alpha
Helix 32
AD5
B
572 606Right-handed alpha
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There are no sheets in PDB entry 9JXR
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il