Analysis of interatomic Contacts of Structural Units in PDB entry:
9JZF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JZF entry

There are 2 chains in PDB entry 9JZF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 91ASP 414
B
 VAL 98ILE 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 33 helices in PDB entry 9JZF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
91 96Right-handed alpha
Helix 2
AA2
A
99 108Right-handed alpha
Helix 3
AA3
A
109 113Right-handed 310
Helix 4
AA4
A
118 131Right-handed alpha
Helix 5
AA5
A
135 153Right-handed alpha
Helix 6
AA6
A
158 184Right-handed alpha
Helix 7
AA7
A
194 221Right-handed alpha
Helix 8
AA8
A
223 247Right-handed alpha
Helix 9
AA9
A
254 266Right-handed alpha
Helix 10
AB1
A
266 280Right-handed alpha
Helix 11
AB2
A
284 313Right-handed alpha
Helix 12
AB3
A
314 319Right-handed alpha
Helix 13
AB4
A
324 329Right-handed alpha
Helix 14
AB5
A
332 339Right-handed alpha
Helix 15
AB6
A
340 342Right-handed 310
Helix 16
AB7
A
343 351Right-handed alpha
Helix 17
AB8
A
357 369Right-handed alpha
Helix 18
AB9
A
370 389Right-handed alpha
Helix 19
AC1
A
396 410Right-handed alpha
Helix 20
AC2
B
99 117Right-handed alpha
Helix 21
AC3
B
135 152Right-handed alpha
Helix 22
AC4
B
158 180Right-handed alpha
Helix 23
AC5
B
190 199Right-handed alpha
Helix 24
AC6
B
199 221Right-handed alpha
Helix 25
AC7
B
223 248Right-handed alpha
Helix 26
AC8
B
254 266Right-handed alpha
Helix 27
AC9
B
266 281Right-handed alpha
Helix 28
AD1
B
284 312Right-handed alpha
Helix 29
AD2
B
332 337Right-handed alpha
Helix 30
AD3
B
345 351Right-handed alpha
Helix 31
AD4
B
372 390Right-handed alpha
Helix 32
AD5
B
391 393Right-handed 310
Helix 33
AD6
B
396 411Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9JZF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il