Analysis of interatomic Contacts of Structural Units in PDB entry:
9JZI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JZI entry

There is 1 chain in PDB entry 9JZI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24ASN 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9JZI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 51Right-handed 310
Helix 2
AA2
A
52 60Right-handed alpha
Helix 3
AA3
A
62 67Right-handed alpha
Helix 4
AA4
A
72 83Right-handed alpha
Helix 5
AA5
A
85 94Right-handed alpha
Helix 6
AA6
A
129 150Right-handed alpha
Helix 7
AA7
A
152 158Right-handed alpha
Helix 8
AA8
A
159 173Right-handed alpha
Helix 9
AA9
A
177 182Right-handed alpha
Helix 10
AB1
A
190 200Right-handed alpha
Helix 11
AB2
A
202 213Right-handed alpha
Helix 12
AB3
A
218 230Right-handed alpha
Helix 13
AB4
A
235 248Right-handed alpha
Helix 14
AB5
A
250 254Right-handed 310
Helix 15
AB6
A
255 276Right-handed alpha
Helix 16
AB7
A
279 283Right-handed 310
Helix 17
AB8
A
288 295Right-handed 310
Helix 18
AB9
A
299 314Right-handed alpha
Helix 19
AC1
A
332 342Right-handed alpha
Helix 20
AC2
A
354 363Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9JZI.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 105first strand
Strand 2
A
112 115anti-parallel
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