Analysis of interatomic Contacts of Structural Units in PDB entry:
9JZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JZK entry

There are 5 chains in PDB entry 9JZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 PRO 27ASN 370
A
 PRO 27ASN 370
B
 PRO 27ASN 370
C
 PRO 27ASN 370
E
 PRO 27ASN 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 9JZK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
52 61Right-handed alpha
Helix 2
AA2
D
62 69Right-handed alpha
Helix 3
AA3
D
72 83Right-handed alpha
Helix 4
AA4
D
85 93Right-handed alpha
Helix 5
AA5
D
129 149Right-handed alpha
Helix 6
AA6
D
152 158Right-handed alpha
Helix 7
AA7
D
158 173Right-handed alpha
Helix 8
AA8
D
177 182Right-handed alpha
Helix 9
AA9
D
183 187Right-handed 310
Helix 10
AB1
D
190 200Right-handed alpha
Helix 11
AB2
D
202 213Right-handed alpha
Helix 12
AB3
D
216 231Right-handed alpha
Helix 13
AB4
D
235 248Right-handed alpha
Helix 14
AB5
D
250 254Right-handed 310
Helix 15
AB6
D
255 277Right-handed alpha
Helix 16
AB7
D
278 283Right-handed 310
Helix 17
AB8
D
288 295Right-handed 310
Helix 18
AB9
D
299 314Right-handed alpha
Helix 19
AC1
D
332 342Right-handed alpha
Helix 20
AC2
D
354 365Right-handed alpha
Helix 21
AC3
A
53 61Right-handed alpha
Helix 22
AC4
A
62 69Right-handed alpha
Helix 23
AC5
A
72 83Right-handed alpha
Helix 24
AC6
A
85 93Right-handed alpha
Helix 25
AC7
A
129 150Right-handed alpha
Helix 26
AC8
A
152 157Right-handed alpha
Helix 27
AC9
A
158 174Right-handed alpha
Helix 28
AD1
A
175 182Right-handed alpha
Helix 29
AD2
A
190 200Right-handed alpha
Helix 30
AD3
A
202 213Right-handed alpha
Helix 31
AD4
A
216 231Right-handed alpha
Helix 32
AD5
A
235 247Right-handed alpha
Helix 33
AD6
A
250 254Right-handed 310
Helix 34
AD7
A
255 277Right-handed alpha
Helix 35
AD8
A
278 283Right-handed 310
Helix 36
AD9
A
288 295Right-handed 310
Helix 37
AE1
A
299 314Right-handed alpha
Helix 38
AE2
A
332 342Right-handed alpha
Helix 39
AE3
A
354 365Right-handed alpha
Helix 40
AE4
B
52 61Right-handed alpha
Helix 41
AE5
B
62 69Right-handed alpha
Helix 42
AE6
B
72 83Right-handed alpha
Helix 43
AE7
B
85 93Right-handed alpha
Helix 44
AE8
B
129 149Right-handed alpha
Helix 45
AE9
B
152 158Right-handed alpha
Helix 46
AF1
B
159 173Right-handed alpha
Helix 47
AF2
B
175 182Right-handed alpha
Helix 48
AF3
B
190 200Right-handed alpha
Helix 49
AF4
B
202 213Right-handed alpha
Helix 50
AF5
B
216 231Right-handed alpha
Helix 51
AF6
B
235 246Right-handed alpha
Helix 52
AF7
B
250 254Right-handed 310
Helix 53
AF8
B
255 277Right-handed alpha
Helix 54
AF9
B
278 283Right-handed 310
Helix 55
AG1
B
288 295Right-handed 310
Helix 56
AG2
B
299 314Right-handed alpha
Helix 57
AG3
B
332 342Right-handed alpha
Helix 58
AG4
B
354 365Right-handed alpha
Helix 59
AG5
C
52 61Right-handed alpha
Helix 60
AG6
C
62 68Right-handed alpha
Helix 61
AG7
C
72 83Right-handed alpha
Helix 62
AG8
C
85 93Right-handed alpha
Helix 63
AG9
C
129 150Right-handed alpha
Helix 64
AH1
C
152 157Right-handed alpha
Helix 65
AH2
C
160 173Right-handed alpha
Helix 66
AH3
C
175 182Right-handed alpha
Helix 67
AH4
C
190 200Right-handed alpha
Helix 68
AH5
C
202 213Right-handed alpha
Helix 69
AH6
C
216 231Right-handed alpha
Helix 70
AH7
C
235 247Right-handed alpha
Helix 71
AH8
C
250 254Right-handed 310
Helix 72
AH9
C
255 276Right-handed alpha
Helix 73
AI1
C
279 283Right-handed 310
Helix 74
AI2
C
288 295Right-handed 310
Helix 75
AI3
C
299 314Right-handed alpha
Helix 76
AI4
C
332 342Right-handed alpha
Helix 77
AI5
C
354 365Right-handed alpha
Helix 78
AI6
E
52 61Right-handed alpha
Helix 79
AI7
E
62 69Right-handed alpha
Helix 80
AI8
E
72 83Right-handed alpha
Helix 81
AI9
E
85 94Right-handed alpha
Helix 82
AJ1
E
129 150Right-handed alpha
Helix 83
AJ2
E
158 173Right-handed alpha
Helix 84
AJ3
E
175 182Right-handed alpha
Helix 85
AJ4
E
191 200Right-handed alpha
Helix 86
AJ5
E
202 213Right-handed alpha
Helix 87
AJ6
E
216 231Right-handed alpha
Helix 88
AJ7
E
235 248Right-handed alpha
Helix 89
AJ8
E
250 254Right-handed 310
Helix 90
AJ9
E
255 276Right-handed alpha
Helix 91
AK1
E
279 283Right-handed 310
Helix 92
AK2
E
288 294Right-handed alpha
Helix 93
AK3
E
295 298Right-handed 310
Helix 94
AK4
E
299 314Right-handed alpha
Helix 95
AK5
E
332 343Right-handed alpha
Helix 96
AK6
E
354 365Right-handed alpha
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There are 6 sheets in PDB entry 9JZK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
99 100first strand
Strand 2
D
114 115anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
344 345first strand
Strand 2
E
368 369anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
368 369first strand
Strand 2
C
344 345anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 100first strand
Strand 2
A
114 115anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 345first strand
Strand 2
B
368 369anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
99 100first strand
Strand 2
C
114 115anti-parallel
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