Analysis of interatomic Contacts of Structural Units in PDB entry:
9JZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9JZZ entry

There is 1 chain in PDB entry 9JZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 14LEU 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 9JZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 28Right-handed alpha
Helix 2
AA2
A
29 33Right-handed 310
Helix 3
AA3
A
65 74Right-handed alpha
Helix 4
AA4
A
78 92Right-handed alpha
Helix 5
AA5
A
93 95Right-handed 310
Helix 6
AA6
A
111 130Right-handed alpha
Helix 7
AA7
A
159 163Right-handed 310
Helix 8
AA8
A
184 200Right-handed alpha
Helix 9
AA9
A
210 216Right-handed alpha
Helix 10
AB1
A
221 232Right-handed alpha
Helix 11
AB2
A
245 250Right-handed alpha
Helix 12
AB3
A
264 273Right-handed alpha
Helix 13
AB4
A
276 284Right-handed alpha
Helix 14
AB5
A
295 297Right-handed 310
Helix 15
AB6
A
298 307Right-handed alpha
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There are 3 sheets in PDB entry 9JZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
47 50anti-parallel
Strand 3
A
55 62anti-parallel
Strand 4
A
148 158anti-parallel
Strand 5
A
97 107anti-parallel
Strand 6
A
132 140parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 239first strand
Strand 2
A
288 294anti-parallel
Strand 3
A
174 179anti-parallel
Strand 4
A
312 319anti-parallel
Strand 5
A
255 258anti-parallel
Strand 6
A
325 327parallel
Strand 7
A
332 334anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 205first strand
Strand 2
A
208 209anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il