Analysis of interatomic Contacts of Structural Units in PDB entry:
9K2P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9K2P entry

There are 2 chains in PDB entry 9K2P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 333
B
 MET 1ASP 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 9K2P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 17Right-handed 310
Helix 2
AA2
A
42 44Right-handed 310
Helix 3
AA3
A
49 64Right-handed alpha
Helix 4
AA4
A
79 93Right-handed alpha
Helix 5
AA5
A
105 115Right-handed alpha
Helix 6
AA6
A
133 145Right-handed alpha
Helix 7
AA7
A
157 163Right-handed alpha
Helix 8
AA8
A
163 174Right-handed alpha
Helix 9
AA9
A
188 202Right-handed alpha
Helix 10
AB1
A
216 224Right-handed alpha
Helix 11
AB2
A
227 231Right-handed 310
Helix 12
AB3
A
249 253Right-handed 310
Helix 13
AB4
A
260 276Right-handed alpha
Helix 14
AB5
A
280 296Right-handed alpha
Helix 15
AB6
A
312 316Right-handed 310
Helix 16
AB7
A
322 329Right-handed alpha
Helix 17
AB8
B
12 17Right-handed 310
Helix 18
AB9
B
42 44Right-handed 310
Helix 19
AC1
B
49 64Right-handed alpha
Helix 20
AC2
B
79 93Right-handed alpha
Helix 21
AC3
B
105 114Right-handed alpha
Helix 22
AC4
B
133 145Right-handed alpha
Helix 23
AC5
B
157 163Right-handed alpha
Helix 24
AC6
B
163 174Right-handed alpha
Helix 25
AC7
B
188 202Right-handed alpha
Helix 26
AC8
B
216 224Right-handed alpha
Helix 27
AC9
B
227 231Right-handed 310
Helix 28
AD1
B
260 276Right-handed alpha
Helix 29
AD2
B
280 296Right-handed alpha
Helix 30
AD3
B
312 317Right-handed 310
Helix 31
AD4
B
322 329Right-handed alpha
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There are 4 sheets in PDB entry 9K2P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 25first strand
Strand 2
A
35 40anti-parallel
Strand 3
A
304 309parallel
Strand 4
A
180 184parallel
Strand 5
A
206 212parallel
Strand 6
A
255 259parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 122first strand
Strand 2
A
95 101parallel
Strand 3
A
72 76parallel
Strand 4
A
148 150parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 25first strand
Strand 2
B
35 40anti-parallel
Strand 3
B
304 309parallel
Strand 4
B
180 184parallel
Strand 5
B
206 212parallel
Strand 6
B
255 259parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 122first strand
Strand 2
B
95 101parallel
Strand 3
B
72 76parallel
Strand 4
B
148 150parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il