Analysis of interatomic Contacts of Structural Units in PDB entry:
9K85


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9K85 entry

There are 21 chains in PDB entry 9K85 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 6PHE 213
B
SER 6PHE 213
C
SER 6PHE 213
D
SER 6PHE 213
E
SER 6PHE 213
F
SER 6PHE 213
G
SER 6PHE 213
H
SER 6PHE 213
I
SER 6PHE 213
J
SER 6PHE 213
K
SER 6PHE 213
L
SER 6PHE 213
M
SER 6PHE 213
N
SER 6PHE 213
O
SER 6PHE 213
P
SER 6PHE 213
Q
SER 6PHE 213
R
SER 6PHE 213
S
SER 6PHE 213
T
SER 6PHE 213
U
SER 6PHE 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are189 helices in PDB entry 9K85. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
6 26Right-handed alpha
Helix 2
AA2
A
30 51Right-handed alpha
Helix 3
AA3
A
58 80Right-handed alpha
Helix 4
AA4
A
82 105Right-handed alpha
Helix 5
AA5
A
108 131Right-handed alpha
Helix 6
AA6
A
134 156Right-handed alpha
Helix 7
AA7
A
159 182Right-handed alpha
Helix 8
AA8
A
183 185Right-handed 310
Helix 9
AA9
A
186 213Right-handed alpha
Helix 10
AB1
B
7 27Right-handed alpha
Helix 11
AB2
B
30 51Right-handed alpha
Helix 12
AB3
B
58 80Right-handed alpha
Helix 13
AB4
B
82 105Right-handed alpha
Helix 14
AB5
B
108 131Right-handed alpha
Helix 15
AB6
B
134 156Right-handed alpha
Helix 16
AB7
B
159 182Right-handed alpha
Helix 17
AB8
B
183 185Right-handed 310
Helix 18
AB9
B
186 213Right-handed alpha
Helix 19
AC1
C
7 27Right-handed alpha
Helix 20
AC2
C
30 51Right-handed alpha
Helix 21
AC3
C
58 80Right-handed alpha
Helix 22
AC4
C
82 105Right-handed alpha
Helix 23
AC5
C
108 131Right-handed alpha
Helix 24
AC6
C
134 156Right-handed alpha
Helix 25
AC7
C
159 182Right-handed alpha
Helix 26
AC8
C
183 185Right-handed 310
Helix 27
AC9
C
186 213Right-handed alpha
Helix 28
AD1
D
7 27Right-handed alpha
Helix 29
AD2
D
30 51Right-handed alpha
Helix 30
AD3
D
58 80Right-handed alpha
Helix 31
AD4
D
82 105Right-handed alpha
Helix 32
AD5
D
108 131Right-handed alpha
Helix 33
AD6
D
134 156Right-handed alpha
Helix 34
AD7
D
159 182Right-handed alpha
Helix 35
AD8
D
183 185Right-handed 310
Helix 36
AD9
D
186 213Right-handed alpha
Helix 37
AE1
E
7 27Right-handed alpha
Helix 38
AE2
E
30 51Right-handed alpha
Helix 39
AE3
E
58 80Right-handed alpha
Helix 40
AE4
E
82 105Right-handed alpha
Helix 41
AE5
E
108 131Right-handed alpha
Helix 42
AE6
E
134 156Right-handed alpha
Helix 43
AE7
E
159 182Right-handed alpha
Helix 44
AE8
E
183 185Right-handed 310
Helix 45
AE9
E
186 213Right-handed alpha
Helix 46
AF1
F
7 27Right-handed alpha
Helix 47
AF2
F
30 51Right-handed alpha
Helix 48
AF3
F
58 80Right-handed alpha
Helix 49
AF4
F
82 105Right-handed alpha
Helix 50
AF5
F
108 131Right-handed alpha
Helix 51
AF6
F
134 156Right-handed alpha
Helix 52
AF7
F
159 182Right-handed alpha
Helix 53
AF8
F
183 185Right-handed 310
Helix 54
AF9
F
186 213Right-handed alpha
Helix 55
AG1
G
7 27Right-handed alpha
Helix 56
AG2
G
30 52Right-handed alpha
Helix 57
AG3
G
58 80Right-handed alpha
Helix 58
AG4
G
82 105Right-handed alpha
Helix 59
AG5
G
108 131Right-handed alpha
Helix 60
AG6
G
134 156Right-handed alpha
Helix 61
AG7
G
159 182Right-handed alpha
Helix 62
AG8
G
183 185Right-handed 310
Helix 63
AG9
G
186 213Right-handed alpha
Helix 64
AH1
H
7 27Right-handed alpha
Helix 65
AH2
H
30 51Right-handed alpha
Helix 66
AH3
H
58 80Right-handed alpha
Helix 67
AH4
H
82 105Right-handed alpha
Helix 68
AH5
H
108 131Right-handed alpha
Helix 69
AH6
H
134 156Right-handed alpha
Helix 70
AH7
H
159 182Right-handed alpha
Helix 71
AH8
H
183 185Right-handed 310
Helix 72
AH9
H
186 213Right-handed alpha
Helix 73
AI1
I
7 27Right-handed alpha
Helix 74
AI2
I
30 51Right-handed alpha
Helix 75
AI3
I
58 80Right-handed alpha
Helix 76
AI4
I
82 105Right-handed alpha
Helix 77
AI5
I
108 131Right-handed alpha
Helix 78
AI6
I
134 156Right-handed alpha
Helix 79
AI7
I
159 182Right-handed alpha
Helix 80
AI8
I
183 185Right-handed 310
Helix 81
AI9
I
186 213Right-handed alpha
Helix 82
AJ1
J
7 27Right-handed alpha
Helix 83
AJ2
J
30 51Right-handed alpha
Helix 84
AJ3
J
58 80Right-handed alpha
Helix 85
AJ4
J
82 105Right-handed alpha
Helix 86
AJ5
J
108 131Right-handed alpha
Helix 87
AJ6
J
134 156Right-handed alpha
Helix 88
AJ7
J
159 182Right-handed alpha
Helix 89
AJ8
J
183 185Right-handed 310
Helix 90
AJ9
J
186 213Right-handed alpha
Helix 91
AK1
K
7 27Right-handed alpha
Helix 92
AK2
K
30 51Right-handed alpha
Helix 93
AK3
K
58 80Right-handed alpha
Helix 94
AK4
K
82 105Right-handed alpha
Helix 95
AK5
K
108 131Right-handed alpha
Helix 96
AK6
K
134 156Right-handed alpha
Helix 97
AK7
K
159 182Right-handed alpha
Helix 98
AK8
K
183 185Right-handed 310
Helix 99
AK9
K
186 213Right-handed alpha
Helix 100
AL1
L
7 27Right-handed alpha
Helix 101
AL2
L
30 51Right-handed alpha
Helix 102
AL3
L
58 80Right-handed alpha
Helix 103
AL4
L
82 105Right-handed alpha
Helix 104
AL5
L
108 131Right-handed alpha
Helix 105
AL6
L
134 156Right-handed alpha
Helix 106
AL7
L
159 182Right-handed alpha
Helix 107
AL8
L
183 185Right-handed 310
Helix 108
AL9
L
186 213Right-handed alpha
Helix 109
AM1
M
7 27Right-handed alpha
Helix 110
AM2
M
30 51Right-handed alpha
Helix 111
AM3
M
58 80Right-handed alpha
Helix 112
AM4
M
82 105Right-handed alpha
Helix 113
AM5
M
108 131Right-handed alpha
Helix 114
AM6
M
134 156Right-handed alpha
Helix 115
AM7
M
159 182Right-handed alpha
Helix 116
AM8
M
183 185Right-handed 310
Helix 117
AM9
M
186 213Right-handed alpha
Helix 118
AN1
N
7 27Right-handed alpha
Helix 119
AN2
N
30 51Right-handed alpha
Helix 120
AN3
N
58 80Right-handed alpha
Helix 121
AN4
N
82 105Right-handed alpha
Helix 122
AN5
N
108 131Right-handed alpha
Helix 123
AN6
N
134 156Right-handed alpha
Helix 124
AN7
N
159 182Right-handed alpha
Helix 125
AN8
N
183 185Right-handed 310
Helix 126
AN9
N
186 213Right-handed alpha
Helix 127
AO1
O
7 27Right-handed alpha
Helix 128
AO2
O
30 51Right-handed alpha
Helix 129
AO3
O
58 80Right-handed alpha
Helix 130
AO4
O
82 105Right-handed alpha
Helix 131
AO5
O
108 131Right-handed alpha
Helix 132
AO6
O
134 156Right-handed alpha
Helix 133
AO7
O
159 182Right-handed alpha
Helix 134
AO8
O
183 185Right-handed 310
Helix 135
AO9
O
186 213Right-handed alpha
Helix 136
AP1
P
7 27Right-handed alpha
Helix 137
AP2
P
30 51Right-handed alpha
Helix 138
AP3
P
58 80Right-handed alpha
Helix 139
AP4
P
82 105Right-handed alpha
Helix 140
AP5
P
108 131Right-handed alpha
Helix 141
AP6
P
134 156Right-handed alpha
Helix 142
AP7
P
159 182Right-handed alpha
Helix 143
AP8
P
183 185Right-handed 310
Helix 144
AP9
P
186 213Right-handed alpha
Helix 145
AQ1
Q
7 27Right-handed alpha
Helix 146
AQ2
Q
30 51Right-handed alpha
Helix 147
AQ3
Q
58 80Right-handed alpha
Helix 148
AQ4
Q
82 105Right-handed alpha
Helix 149
AQ5
Q
108 131Right-handed alpha
Helix 150
AQ6
Q
134 156Right-handed alpha
Helix 151
AQ7
Q
159 182Right-handed alpha
Helix 152
AQ8
Q
183 185Right-handed 310
Helix 153
AQ9
Q
186 213Right-handed alpha
Helix 154
AR1
R
7 27Right-handed alpha
Helix 155
AR2
R
30 51Right-handed alpha
Helix 156
AR3
R
58 80Right-handed alpha
Helix 157
AR4
R
82 105Right-handed alpha
Helix 158
AR5
R
108 131Right-handed alpha
Helix 159
AR6
R
134 156Right-handed alpha
Helix 160
AR7
R
159 182Right-handed alpha
Helix 161
AR8
R
183 185Right-handed 310
Helix 162
AR9
R
186 213Right-handed alpha
Helix 163
AS1
S
7 27Right-handed alpha
Helix 164
AS2
S
30 51Right-handed alpha
Helix 165
AS3
S
58 80Right-handed alpha
Helix 166
AS4
S
82 105Right-handed alpha
Helix 167
AS5
S
108 131Right-handed alpha
Helix 168
AS6
S
134 156Right-handed alpha
Helix 169
AS7
S
159 182Right-handed alpha
Helix 170
AS8
S
183 185Right-handed 310
Helix 171
AS9
S
186 213Right-handed alpha
Helix 172
AT1
T
7 27Right-handed alpha
Helix 173
AT2
T
30 51Right-handed alpha
Helix 174
AT3
T
58 80Right-handed alpha
Helix 175
AT4
T
82 105Right-handed alpha
Helix 176
AT5
T
108 131Right-handed alpha
Helix 177
AT6
T
134 156Right-handed alpha
Helix 178
AT7
T
159 182Right-handed alpha
Helix 179
AT8
T
183 185Right-handed 310
Helix 180
AT9
T
186 213Right-handed alpha
Helix 181
AU1
U
7 27Right-handed alpha
Helix 182
AU2
U
30 51Right-handed alpha
Helix 183
AU3
U
58 80Right-handed alpha
Helix 184
AU4
U
82 105Right-handed alpha
Helix 185
AU5
U
108 131Right-handed alpha
Helix 186
AU6
U
134 156Right-handed alpha
Helix 187
AU7
U
159 182Right-handed alpha
Helix 188
AU8
U
183 185Right-handed 310
Helix 189
AU9
U
186 213Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9K85

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il