Analysis of interatomic Contacts of Structural Units in PDB entry:
9K88


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9K88 entry

There is 1 chain in PDB entry 9K88 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 30PRO 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 9K88. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 59Right-handed alpha
Helix 2
AA2
A
62 82Right-handed alpha
Helix 3
AA3
A
86 88Right-handed 310
Helix 4
AA4
A
89 111Right-handed alpha
Helix 5
AA5
A
112 144Right-handed alpha
Helix 6
AA6
A
149 172Right-handed alpha
Helix 7
AA7
A
184 210Right-handed alpha
Helix 8
AA8
A
231 239Right-handed alpha
Helix 9
AA9
A
240 257Right-handed alpha
Helix 10
AB1
A
264 270Right-handed alpha
Helix 11
AB2
A
272 290Right-handed alpha
Helix 12
AB3
A
299 306Right-handed 310
Helix 13
AB4
A
309 316Right-handed alpha
Helix 14
AB5
A
317 320Right-handed 310
Helix 15
AB6
A
321 332Right-handed alpha
Helix 16
AB7
A
339 360Right-handed alpha
Helix 17
AB8
A
361 363Right-handed 310
Helix 18
AB9
A
364 369Right-handed alpha
Helix 19
AC1
A
374 399Right-handed alpha
Helix 20
AC2
A
400 406Right-handed 310
Back to top of page
There are no sheets in PDB entry 9K88
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il