Analysis of interatomic Contacts of Structural Units in PDB entry:
9K8I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9K8I entry

There are 12 chains in PDB entry 9K8I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 3	ASP 251
B	GLY 3	ASP 251
C	GLY 3	ASP 251
D	GLY 3	ASP 251
G	GLY 3	ASP 251
J	GLY 3	ASP 251
E	GLY 3	ASP 251
H	GLY 3	ASP 251
K	GLY 3	ASP 251
F	GLY 3	ASP 251
I	GLY 3	ASP 251
L	GLY 3	ASP 251

There are156 helices in PDB entry 9K8I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	19	Right-handed alpha
Helix 2	AA2	A	24	40	Right-handed alpha
Helix 3	AA3	A	43	60	Right-handed alpha
Helix 4	AA4	A	61	76	Right-handed alpha
Helix 5	AA5	A	80	98	Right-handed alpha
Helix 6	AA6	A	99	115	Right-handed alpha
Helix 7	AA7	A	118	138	Right-handed alpha
Helix 8	AA8	A	140	154	Right-handed alpha
Helix 9	AA9	A	160	178	Right-handed alpha
Helix 10	AB1	A	181	195	Right-handed alpha
Helix 11	AB2	A	197	211	Right-handed alpha
Helix 12	AB3	A	214	231	Right-handed alpha
Helix 13	AB4	A	234	251	Right-handed alpha
Helix 14	AB5	B	7	19	Right-handed alpha
Helix 15	AB6	B	24	40	Right-handed alpha
Helix 16	AB7	B	43	60	Right-handed alpha
Helix 17	AB8	B	61	76	Right-handed alpha
Helix 18	AB9	B	80	98	Right-handed alpha
Helix 19	AC1	B	99	115	Right-handed alpha
Helix 20	AC2	B	118	138	Right-handed alpha
Helix 21	AC3	B	140	154	Right-handed alpha
Helix 22	AC4	B	160	178	Right-handed alpha
Helix 23	AC5	B	181	195	Right-handed alpha
Helix 24	AC6	B	197	211	Right-handed alpha
Helix 25	AC7	B	214	231	Right-handed alpha
Helix 26	AC8	B	234	251	Right-handed alpha
Helix 27	AC9	C	7	19	Right-handed alpha
Helix 28	AD1	C	24	40	Right-handed alpha
Helix 29	AD2	C	43	60	Right-handed alpha
Helix 30	AD3	C	61	76	Right-handed alpha
Helix 31	AD4	C	80	98	Right-handed alpha
Helix 32	AD5	C	99	115	Right-handed alpha
Helix 33	AD6	C	118	138	Right-handed alpha
Helix 34	AD7	C	140	155	Right-handed alpha
Helix 35	AD8	C	160	178	Right-handed alpha
Helix 36	AD9	C	181	195	Right-handed alpha
Helix 37	AE1	C	197	211	Right-handed alpha
Helix 38	AE2	C	214	231	Right-handed alpha
Helix 39	AE3	C	234	251	Right-handed alpha
Helix 40	AE4	D	7	19	Right-handed alpha
Helix 41	AE5	D	24	40	Right-handed alpha
Helix 42	AE6	D	43	60	Right-handed alpha
Helix 43	AE7	D	61	76	Right-handed alpha
Helix 44	AE8	D	80	98	Right-handed alpha
Helix 45	AE9	D	99	115	Right-handed alpha
Helix 46	AF1	D	118	138	Right-handed alpha
Helix 47	AF2	D	140	154	Right-handed alpha
Helix 48	AF3	D	160	178	Right-handed alpha
Helix 49	AF4	D	181	195	Right-handed alpha
Helix 50	AF5	D	197	211	Right-handed alpha
Helix 51	AF6	D	214	231	Right-handed alpha
Helix 52	AF7	D	234	251	Right-handed alpha
Helix 53	AF8	G	7	19	Right-handed alpha
Helix 54	AF9	G	24	40	Right-handed alpha
Helix 55	AG1	G	43	60	Right-handed alpha
Helix 56	AG2	G	61	76	Right-handed alpha
Helix 57	AG3	G	80	98	Right-handed alpha
Helix 58	AG4	G	99	115	Right-handed alpha
Helix 59	AG5	G	118	138	Right-handed alpha
Helix 60	AG6	G	140	154	Right-handed alpha
Helix 61	AG7	G	160	178	Right-handed alpha
Helix 62	AG8	G	181	195	Right-handed alpha
Helix 63	AG9	G	197	211	Right-handed alpha
Helix 64	AH1	G	214	231	Right-handed alpha
Helix 65	AH2	G	234	251	Right-handed alpha
Helix 66	AH3	J	7	19	Right-handed alpha
Helix 67	AH4	J	24	40	Right-handed alpha
Helix 68	AH5	J	43	60	Right-handed alpha
Helix 69	AH6	J	61	76	Right-handed alpha
Helix 70	AH7	J	80	98	Right-handed alpha
Helix 71	AH8	J	99	115	Right-handed alpha
Helix 72	AH9	J	118	138	Right-handed alpha
Helix 73	AI1	J	140	154	Right-handed alpha
Helix 74	AI2	J	160	178	Right-handed alpha
Helix 75	AI3	J	181	195	Right-handed alpha
Helix 76	AI4	J	197	210	Right-handed alpha
Helix 77	AI5	J	214	231	Right-handed alpha
Helix 78	AI6	J	234	251	Right-handed alpha
Helix 79	AI7	E	7	19	Right-handed alpha
Helix 80	AI8	E	24	40	Right-handed alpha
Helix 81	AI9	E	43	60	Right-handed alpha
Helix 82	AJ1	E	61	76	Right-handed alpha
Helix 83	AJ2	E	80	98	Right-handed alpha
Helix 84	AJ3	E	99	115	Right-handed alpha
Helix 85	AJ4	E	118	138	Right-handed alpha
Helix 86	AJ5	E	140	154	Right-handed alpha
Helix 87	AJ6	E	160	178	Right-handed alpha
Helix 88	AJ7	E	181	195	Right-handed alpha
Helix 89	AJ8	E	197	211	Right-handed alpha
Helix 90	AJ9	E	214	231	Right-handed alpha
Helix 91	AK1	E	234	251	Right-handed alpha
Helix 92	AK2	H	7	19	Right-handed alpha
Helix 93	AK3	H	24	40	Right-handed alpha
Helix 94	AK4	H	43	60	Right-handed alpha
Helix 95	AK5	H	61	76	Right-handed alpha
Helix 96	AK6	H	80	98	Right-handed alpha
Helix 97	AK7	H	99	115	Right-handed alpha
Helix 98	AK8	H	118	138	Right-handed alpha
Helix 99	AK9	H	140	154	Right-handed alpha
Helix 100	AL1	H	160	178	Right-handed alpha
Helix 101	AL2	H	181	195	Right-handed alpha
Helix 102	AL3	H	197	211	Right-handed alpha
Helix 103	AL4	H	214	231	Right-handed alpha
Helix 104	AL5	H	234	251	Right-handed alpha
Helix 105	AL6	K	7	19	Right-handed alpha
Helix 106	AL7	K	24	40	Right-handed alpha
Helix 107	AL8	K	43	60	Right-handed alpha
Helix 108	AL9	K	61	76	Right-handed alpha
Helix 109	AM1	K	80	98	Right-handed alpha
Helix 110	AM2	K	99	115	Right-handed alpha
Helix 111	AM3	K	118	138	Right-handed alpha
Helix 112	AM4	K	140	154	Right-handed alpha
Helix 113	AM5	K	160	178	Right-handed alpha
Helix 114	AM6	K	181	195	Right-handed alpha
Helix 115	AM7	K	197	211	Right-handed alpha
Helix 116	AM8	K	214	231	Right-handed alpha
Helix 117	AM9	K	234	251	Right-handed alpha
Helix 118	AN1	F	7	19	Right-handed alpha
Helix 119	AN2	F	24	40	Right-handed alpha
Helix 120	AN3	F	43	60	Right-handed alpha
Helix 121	AN4	F	61	76	Right-handed alpha
Helix 122	AN5	F	80	98	Right-handed alpha
Helix 123	AN6	F	99	115	Right-handed alpha
Helix 124	AN7	F	118	138	Right-handed alpha
Helix 125	AN8	F	140	154	Right-handed alpha
Helix 126	AN9	F	160	178	Right-handed alpha
Helix 127	AO1	F	181	195	Right-handed alpha
Helix 128	AO2	F	197	211	Right-handed alpha
Helix 129	AO3	F	214	231	Right-handed alpha
Helix 130	AO4	F	234	251	Right-handed alpha
Helix 131	AO5	I	7	19	Right-handed alpha
Helix 132	AO6	I	24	40	Right-handed alpha
Helix 133	AO7	I	43	60	Right-handed alpha
Helix 134	AO8	I	61	76	Right-handed alpha
Helix 135	AO9	I	80	98	Right-handed alpha
Helix 136	AP1	I	99	115	Right-handed alpha
Helix 137	AP2	I	118	138	Right-handed alpha
Helix 138	AP3	I	140	154	Right-handed alpha
Helix 139	AP4	I	160	178	Right-handed alpha
Helix 140	AP5	I	181	195	Right-handed alpha
Helix 141	AP6	I	197	211	Right-handed alpha
Helix 142	AP7	I	214	231	Right-handed alpha
Helix 143	AP8	I	234	251	Right-handed alpha
Helix 144	AP9	L	7	19	Right-handed alpha
Helix 145	AQ1	L	24	40	Right-handed alpha
Helix 146	AQ2	L	43	60	Right-handed alpha
Helix 147	AQ3	L	61	76	Right-handed alpha
Helix 148	AQ4	L	80	98	Right-handed alpha
Helix 149	AQ5	L	99	115	Right-handed alpha
Helix 150	AQ6	L	118	138	Right-handed alpha
Helix 151	AQ7	L	140	154	Right-handed alpha
Helix 152	AQ8	L	160	178	Right-handed alpha
Helix 153	AQ9	L	181	195	Right-handed alpha
Helix 154	AR1	L	197	211	Right-handed alpha
Helix 155	AR2	L	214	231	Right-handed alpha
Helix 156	AR3	L	234	251	Right-handed alpha

There are no sheets in PDB entry 9K8I

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9K8I

Analysis of interatomic Contacts of Structural Units in PDB entry:
9K8I