Analysis of interatomic Contacts of Structural Units in PDB entry:
9K8S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9K8S entry

There are 12 chains in PDB entry 9K8S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 SER 43VAL 67
F
 MET 51GLU 69
G
 SER 43VAL 67
H
 MET 51GLU 69
I
 SER 43VAL 67
J
 MET 51GLU 69
K
 SER 43VAL 67
L
 MET 51GLU 69
M
 SER 43VAL 67
N
 MET 51GLU 69
O
 SER 43VAL 67
P
 MET 51GLU 69
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9K8S

There are 4 sheets in PDB entry 9K8S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
58 59first strand
Strand 2
E
58 59parallel
Strand 3
I
58 59parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
65 66first strand
Strand 2
E
65 66parallel
Strand 3
I
65 66parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
58 59first strand
Strand 2
K
58 59parallel
Strand 3
O
58 59parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
65 66first strand
Strand 2
K
65 66parallel
Strand 3
O
65 66parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il