Analysis of interatomic Contacts of Structural Units in PDB entry:
9K93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9K93 entry

There is 1 chain in PDB entry 9K93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 168SER 494
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9K93. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
169 199Right-handed alpha
Helix 2
AA2
A
219 240Right-handed alpha
Helix 3
AA3
A
240 270Right-handed alpha
Helix 4
AA4
A
287 306Right-handed alpha
Helix 5
AA5
A
312 332Right-handed alpha
Helix 6
AA6
A
336 357Right-handed alpha
Helix 7
AA7
A
358 361Right-handed 310
Helix 8
AA8
A
368 373Right-handed alpha
Helix 9
AA9
A
409 431Right-handed alpha
Helix 10
AB1
A
434 459Right-handed alpha
Helix 11
AB2
A
464 483Right-handed alpha
Helix 12
AB3
A
485 492Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9K93.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
A
405 408anti-parallel
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