Analysis of interatomic Contacts of Structural Units in PDB entry:
9K9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9K9C entry

There are 2 chains in PDB entry 9K9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 86GLN 406
B
 SER 92GLN 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 9K9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
88 90Right-handed 310
Helix 2
AA2
A
91 102Right-handed alpha
Helix 3
AA3
A
110 122Right-handed alpha
Helix 4
AA4
A
128 144Right-handed alpha
Helix 5
AA5
A
150 175Right-handed alpha
Helix 6
AA6
A
185 191Right-handed alpha
Helix 7
AA7
A
191 213Right-handed alpha
Helix 8
AA8
A
215 238Right-handed alpha
Helix 9
AA9
A
246 258Right-handed alpha
Helix 10
AB1
A
258 273Right-handed alpha
Helix 11
AB2
A
276 305Right-handed alpha
Helix 12
AB3
A
306 311Right-handed alpha
Helix 13
AB4
A
315 320Right-handed alpha
Helix 14
AB5
A
324 332Right-handed alpha
Helix 15
AB6
A
334 343Right-handed alpha
Helix 16
AB7
A
349 361Right-handed alpha
Helix 17
AB8
A
362 381Right-handed alpha
Helix 18
AB9
A
388 404Right-handed alpha
Helix 19
AC1
B
93 105Right-handed alpha
Helix 20
AC2
B
116 122Right-handed alpha
Helix 21
AC3
B
123 126Right-handed 310
Helix 22
AC4
B
127 142Right-handed alpha
Helix 23
AC5
B
151 172Right-handed alpha
Helix 24
AC6
B
191 212Right-handed alpha
Helix 25
AC7
B
215 238Right-handed alpha
Helix 26
AC8
B
246 258Right-handed alpha
Helix 27
AC9
B
258 273Right-handed alpha
Helix 28
AD1
B
276 305Right-handed alpha
Helix 29
AD2
B
315 321Right-handed alpha
Helix 30
AD3
B
324 332Right-handed alpha
Helix 31
AD4
B
334 342Right-handed alpha
Helix 32
AD5
B
349 361Right-handed alpha
Helix 33
AD6
B
362 381Right-handed alpha
Helix 34
AD7
B
388 403Right-handed alpha
Helix 35
AD8
B
404 406Right-handed 310
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There is 1 sheet (AA1) in PDB entry 9K9C.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 180first strand
Strand 2
A
183 184anti-parallel
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