Analysis of interatomic Contacts of Structural Units in PDB entry:
9KA1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KA1 entry

There are 2 chains in PDB entry 9KA1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 26GLU 565
B
 THR 22GLU 565
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 9KA1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 48Right-handed alpha
Helix 2
AA2
A
50 73Right-handed alpha
Helix 3
AA3
A
75 89Right-handed alpha
Helix 4
AA4
A
91 94Right-handed 310
Helix 5
AA5
A
95 116Right-handed alpha
Helix 6
AA6
A
119 133Right-handed alpha
Helix 7
AA7
A
138 143Right-handed 310
Helix 8
AA8
A
156 170Right-handed alpha
Helix 9
AA9
A
171 173Right-handed 310
Helix 10
AB1
A
177 195Right-handed alpha
Helix 11
AB2
A
196 198Right-handed 310
Helix 12
AB3
A
201 212Right-handed alpha
Helix 13
AB4
A
219 232Right-handed alpha
Helix 14
AB5
A
238 271Right-handed alpha
Helix 15
AB6
A
271 276Right-handed alpha
Helix 16
AB7
A
282 294Right-handed alpha
Helix 17
AB8
A
296 298Right-handed 310
Helix 18
AB9
A
299 322Right-handed alpha
Helix 19
AC1
A
325 339Right-handed alpha
Helix 20
AC2
A
340 347Right-handed 310
Helix 21
AC3
A
348 373Right-handed alpha
Helix 22
AC4
A
376 402Right-handed alpha
Helix 23
AC5
A
418 429Right-handed alpha
Helix 24
AC6
A
436 445Right-handed alpha
Helix 25
AC7
A
447 467Right-handed alpha
Helix 26
AC8
A
492 512Right-handed alpha
Helix 27
AC9
A
519 538Right-handed alpha
Helix 28
AD1
A
547 559Right-handed alpha
Helix 29
AD2
B
40 73Right-handed alpha
Helix 30
AD3
B
75 90Right-handed alpha
Helix 31
AD4
B
91 94Right-handed 310
Helix 32
AD5
B
95 116Right-handed alpha
Helix 33
AD6
B
119 133Right-handed alpha
Helix 34
AD7
B
138 143Right-handed 310
Helix 35
AD8
B
156 170Right-handed alpha
Helix 36
AD9
B
171 173Right-handed 310
Helix 37
AE1
B
177 195Right-handed alpha
Helix 38
AE2
B
196 198Right-handed 310
Helix 39
AE3
B
201 212Right-handed alpha
Helix 40
AE4
B
219 233Right-handed alpha
Helix 41
AE5
B
238 271Right-handed alpha
Helix 42
AE6
B
271 276Right-handed alpha
Helix 43
AE7
B
282 294Right-handed alpha
Helix 44
AE8
B
296 298Right-handed 310
Helix 45
AE9
B
299 322Right-handed alpha
Helix 46
AF1
B
325 339Right-handed alpha
Helix 47
AF2
B
340 347Right-handed 310
Helix 48
AF3
B
348 373Right-handed alpha
Helix 49
AF4
B
376 399Right-handed alpha
Helix 50
AF5
B
418 429Right-handed alpha
Helix 51
AF6
B
436 445Right-handed alpha
Helix 52
AF7
B
447 468Right-handed alpha
Helix 53
AF8
B
489 511Right-handed alpha
Helix 54
AF9
B
519 538Right-handed alpha
Helix 55
AG1
B
547 559Right-handed alpha
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There are no sheets in PDB entry 9KA1
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