Analysis of interatomic Contacts of Structural Units in PDB entry:
9KCA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KCA entry

There are 5 chains in PDB entry 9KCA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ILE 366
B
 THR 2ILE 366
C
 THR 2ILE 366
D
 THR 2ILE 366
E
 THR 2ILE 366
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 99 helices in PDB entry 9KCA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 9Right-handed 310
Helix 2
AA2
A
18 23Right-handed 310
Helix 3
AA3
A
27 32Right-handed alpha
Helix 4
AA4
A
33 53Right-handed alpha
Helix 5
AA5
A
55 69Right-handed alpha
Helix 6
AA6
A
75 85Right-handed alpha
Helix 7
AA7
A
87 99Right-handed alpha
Helix 8
AA8
A
103 114Right-handed alpha
Helix 9
AA9
A
121 142Right-handed alpha
Helix 10
AB1
A
144 151Right-handed alpha
Helix 11
AB2
A
153 160Right-handed alpha
Helix 12
AB3
A
164 172Right-handed alpha
Helix 13
AB4
A
182 197Right-handed alpha
Helix 14
AB5
A
203 230Right-handed alpha
Helix 15
AB6
A
233 244Right-handed alpha
Helix 16
AB7
A
247 253Right-handed alpha
Helix 17
AB8
A
274 287Right-handed alpha
Helix 18
AB9
A
287 295Right-handed alpha
Helix 19
AC1
A
306 324Right-handed alpha
Helix 20
AC2
A
348 355Right-handed 310
Helix 21
AC3
B
5 9Right-handed 310
Helix 22
AC4
B
18 23Right-handed 310
Helix 23
AC5
B
27 32Right-handed alpha
Helix 24
AC6
B
33 53Right-handed alpha
Helix 25
AC7
B
55 69Right-handed alpha
Helix 26
AC8
B
75 85Right-handed alpha
Helix 27
AC9
B
87 99Right-handed alpha
Helix 28
AD1
B
103 114Right-handed alpha
Helix 29
AD2
B
121 142Right-handed alpha
Helix 30
AD3
B
144 151Right-handed alpha
Helix 31
AD4
B
153 160Right-handed alpha
Helix 32
AD5
B
164 172Right-handed alpha
Helix 33
AD6
B
182 197Right-handed alpha
Helix 34
AD7
B
203 230Right-handed alpha
Helix 35
AD8
B
233 244Right-handed alpha
Helix 36
AD9
B
247 253Right-handed alpha
Helix 37
AE1
B
274 287Right-handed alpha
Helix 38
AE2
B
287 295Right-handed alpha
Helix 39
AE3
B
306 324Right-handed alpha
Helix 40
AE4
B
348 355Right-handed 310
Helix 41
AE5
C
5 9Right-handed 310
Helix 42
AE6
C
18 23Right-handed 310
Helix 43
AE7
C
27 32Right-handed alpha
Helix 44
AE8
C
33 53Right-handed alpha
Helix 45
AE9
C
55 69Right-handed alpha
Helix 46
AF1
C
75 99Right-handed alpha
Helix 47
AF2
C
103 114Right-handed alpha
Helix 48
AF3
C
121 142Right-handed alpha
Helix 49
AF4
C
144 151Right-handed alpha
Helix 50
AF5
C
153 160Right-handed alpha
Helix 51
AF6
C
164 172Right-handed alpha
Helix 52
AF7
C
182 197Right-handed alpha
Helix 53
AF8
C
203 230Right-handed alpha
Helix 54
AF9
C
233 241Right-handed alpha
Helix 55
AG1
C
247 253Right-handed alpha
Helix 56
AG2
C
274 287Right-handed alpha
Helix 57
AG3
C
287 295Right-handed alpha
Helix 58
AG4
C
306 324Right-handed alpha
Helix 59
AG5
C
348 355Right-handed 310
Helix 60
AG6
D
5 9Right-handed 310
Helix 61
AG7
D
18 23Right-handed 310
Helix 62
AG8
D
27 32Right-handed alpha
Helix 63
AG9
D
33 53Right-handed alpha
Helix 64
AH1
D
55 69Right-handed alpha
Helix 65
AH2
D
75 85Right-handed alpha
Helix 66
AH3
D
87 99Right-handed alpha
Helix 67
AH4
D
103 114Right-handed alpha
Helix 68
AH5
D
121 142Right-handed alpha
Helix 69
AH6
D
144 151Right-handed alpha
Helix 70
AH7
D
153 160Right-handed alpha
Helix 71
AH8
D
164 172Right-handed alpha
Helix 72
AH9
D
182 197Right-handed alpha
Helix 73
AI1
D
203 230Right-handed alpha
Helix 74
AI2
D
233 244Right-handed alpha
Helix 75
AI3
D
247 253Right-handed alpha
Helix 76
AI4
D
274 287Right-handed alpha
Helix 77
AI5
D
287 295Right-handed alpha
Helix 78
AI6
D
306 324Right-handed alpha
Helix 79
AI7
D
348 355Right-handed 310
Helix 80
AI8
E
5 9Right-handed 310
Helix 81
AI9
E
17 23Right-handed 310
Helix 82
AJ1
E
27 32Right-handed alpha
Helix 83
AJ2
E
33 53Right-handed alpha
Helix 84
AJ3
E
55 69Right-handed alpha
Helix 85
AJ4
E
75 85Right-handed alpha
Helix 86
AJ5
E
87 99Right-handed alpha
Helix 87
AJ6
E
103 114Right-handed alpha
Helix 88
AJ7
E
121 142Right-handed alpha
Helix 89
AJ8
E
144 151Right-handed alpha
Helix 90
AJ9
E
153 160Right-handed alpha
Helix 91
AK1
E
164 172Right-handed alpha
Helix 92
AK2
E
182 197Right-handed alpha
Helix 93
AK3
E
203 230Right-handed alpha
Helix 94
AK4
E
233 241Right-handed alpha
Helix 95
AK5
E
247 253Right-handed alpha
Helix 96
AK6
E
274 287Right-handed alpha
Helix 97
AK7
E
287 295Right-handed alpha
Helix 98
AK8
E
306 324Right-handed alpha
Helix 99
AK9
E
348 355Right-handed 310
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There are no sheets in PDB entry 9KCA
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