Analysis of interatomic Contacts of Structural Units in PDB entry:
9KCH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KCH entry

There are 8 chains in PDB entry 9KCH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 7VAL 224
B
 ASP 8VAL 224
C
 LEU 7VAL 224
D
 ILE 6VAL 224
E
 LEU 7VAL 224
F
 SER 14ALA 34
G
 LEU 12ALA 34
H
 GLN 7SER 33
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 44 helices in PDB entry 9KCH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 57Right-handed alpha
Helix 2
AA2
A
61 69Right-handed alpha
Helix 3
AA3
A
72 77Right-handed 310
Helix 4
AA4
A
78 97Right-handed alpha
Helix 5
AA5
A
103 124Right-handed alpha
Helix 6
AA6
A
126 135Right-handed alpha
Helix 7
AA7
A
136 156Right-handed alpha
Helix 8
AA8
A
159 163Right-handed 310
Helix 9
AA9
A
164 166Right-handed 310
Helix 10
AB1
A
167 182Right-handed alpha
Helix 11
AB2
A
184 222Right-handed alpha
Helix 12
AB3
B
14 56Right-handed alpha
Helix 13
AB4
B
61 72Right-handed alpha
Helix 14
AB5
B
79 96Right-handed alpha
Helix 15
AB6
B
100 124Right-handed alpha
Helix 16
AB7
B
126 159Right-handed alpha
Helix 17
AB8
B
167 220Right-handed alpha
Helix 18
AB9
C
14 57Right-handed alpha
Helix 19
AC1
C
61 71Right-handed alpha
Helix 20
AC2
C
78 95Right-handed alpha
Helix 21
AC3
C
103 124Right-handed alpha
Helix 22
AC4
C
126 159Right-handed alpha
Helix 23
AC5
C
167 224Right-handed alpha
Helix 24
AC6
D
14 57Right-handed alpha
Helix 25
AC7
D
61 70Right-handed alpha
Helix 26
AC8
D
71 73Right-handed 310
Helix 27
AC9
D
77 96Right-handed alpha
Helix 28
AD1
D
100 124Right-handed alpha
Helix 29
AD2
D
126 157Right-handed alpha
Helix 30
AD3
D
167 184Right-handed alpha
Helix 31
AD4
D
184 222Right-handed alpha
Helix 32
AD5
E
21 57Right-handed alpha
Helix 33
AD6
E
61 71Right-handed alpha
Helix 34
AD7
E
72 77Right-handed 310
Helix 35
AD8
E
78 96Right-handed alpha
Helix 36
AD9
E
100 102Right-handed 310
Helix 37
AE1
E
103 125Right-handed alpha
Helix 38
AE2
E
126 144Right-handed alpha
Helix 39
AE3
E
144 155Right-handed alpha
Helix 40
AE4
E
167 184Right-handed alpha
Helix 41
AE5
E
184 222Right-handed alpha
Helix 42
AE6
F
20 31Right-handed alpha
Helix 43
AE7
G
18 34Right-handed alpha
Helix 44
AE8
H
8 33Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9KCH
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il