Analysis of interatomic Contacts of Structural Units in PDB entry:
9KE2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KE2 entry

There are 2 chains in PDB entry 9KE2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 374
B
 MET 1HIS 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 9KE2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 15Right-handed alpha
Helix 2
AA2
A
17 27Right-handed alpha
Helix 3
AA3
A
39 44Right-handed alpha
Helix 4
AA4
A
57 68Right-handed alpha
Helix 5
AA5
A
79 97Right-handed alpha
Helix 6
AA6
A
98 110Right-handed alpha
Helix 7
AA7
A
121 131Right-handed alpha
Helix 8
AA8
A
143 155Right-handed alpha
Helix 9
AA9
A
155 162Right-handed alpha
Helix 10
AB1
A
177 181Right-handed 310
Helix 11
AB2
A
201 205Right-handed 310
Helix 12
AB3
A
220 226Right-handed alpha
Helix 13
AB4
A
227 229Right-handed 310
Helix 14
AB5
A
230 238Right-handed alpha
Helix 15
AB6
A
253 257Right-handed 310
Helix 16
AB7
A
270 276Right-handed alpha
Helix 17
AB8
A
286 296Right-handed alpha
Helix 18
AB9
A
308 319Right-handed alpha
Helix 19
AC1
A
326 330Right-handed 310
Helix 20
AC2
A
331 341Right-handed alpha
Helix 21
AC3
A
341 357Right-handed alpha
Helix 22
AC4
A
364 373Right-handed alpha
Helix 23
AC5
B
10 15Right-handed alpha
Helix 24
AC6
B
17 27Right-handed alpha
Helix 25
AC7
B
39 44Right-handed alpha
Helix 26
AC8
B
57 68Right-handed alpha
Helix 27
AC9
B
79 97Right-handed alpha
Helix 28
AD1
B
98 110Right-handed alpha
Helix 29
AD2
B
122 131Right-handed alpha
Helix 30
AD3
B
143 155Right-handed alpha
Helix 31
AD4
B
155 162Right-handed alpha
Helix 32
AD5
B
177 181Right-handed 310
Helix 33
AD6
B
201 205Right-handed 310
Helix 34
AD7
B
220 226Right-handed alpha
Helix 35
AD8
B
227 229Right-handed 310
Helix 36
AD9
B
230 238Right-handed alpha
Helix 37
AE1
B
253 257Right-handed 310
Helix 38
AE2
B
270 276Right-handed alpha
Helix 39
AE3
B
286 297Right-handed alpha
Helix 40
AE4
B
308 319Right-handed alpha
Helix 41
AE5
B
331 341Right-handed alpha
Helix 42
AE6
B
341 357Right-handed alpha
Helix 43
AE7
B
364 372Right-handed alpha
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There are 4 sheets in PDB entry 9KE2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 52first strand
Strand 2
A
30 36parallel
Strand 3
A
2 6parallel
Strand 4
A
113 117parallel
Strand 5
A
134 137parallel
Strand 6
A
171 174parallel
Strand 7
A
187 188parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 265first strand
Strand 2
A
243 247parallel
Strand 3
A
212 216parallel
Strand 4
A
280 283parallel
Strand 5
A
300 302parallel
Strand 6
A
322 324parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 51first strand
Strand 2
B
30 35parallel
Strand 3
B
2 6parallel
Strand 4
B
113 117parallel
Strand 5
B
134 137parallel
Strand 6
B
171 174parallel
Strand 7
B
187 188parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
263 265first strand
Strand 2
B
243 247parallel
Strand 3
B
212 216parallel
Strand 4
B
280 283parallel
Strand 5
B
300 302parallel
Strand 6
B
322 324parallel
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