Analysis of interatomic Contacts of Structural Units in PDB entry:
9KF1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KF1 entry

There is 1 chain in PDB entry 9KF1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0SER 202
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9KF1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 23Right-handed alpha
Helix 2
AA2
A
32 37Right-handed alpha
Helix 3
AA3
A
39 49Right-handed alpha
Helix 4
AA4
A
55 60Right-handed alpha
Helix 5
AA5
A
69 72Right-handed 310
Helix 6
AA6
A
73 81Right-handed alpha
Helix 7
AA7
A
92 104Right-handed alpha
Helix 8
AA8
A
104 109Right-handed alpha
Helix 9
AA9
A
117 131Right-handed alpha
Helix 10
AB1
A
138 157Right-handed alpha
Helix 11
AB2
A
158 160Right-handed 310
Helix 12
AB3
A
166 170Right-handed 310
Helix 13
AB4
A
171 179Right-handed alpha
Helix 14
AB5
A
193 199Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9KF1.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
64 65parallel
Strand 3
A
3 5parallel
Strand 4
A
85 89parallel
Strand 5
A
162 165parallel
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