Analysis of interatomic Contacts of Structural Units in PDB entry:
9KFY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KFY entry

There is 1 chain in PDB entry 9KFY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -1TRP 610
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9KFY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 14Right-handed alpha
Helix 2
AA2
A
16 31Right-handed alpha
Helix 3
AA3
A
37 50Right-handed alpha
Helix 4
AA4
A
51 65Right-handed alpha
Helix 5
AA5
A
70 84Right-handed alpha
Helix 6
AA6
A
86 97Right-handed alpha
Helix 7
AA7
A
101 115Right-handed alpha
Helix 8
AA8
A
117 131Right-handed alpha
Helix 9
AA9
A
136 151Right-handed alpha
Helix 10
AB1
A
152 166Right-handed alpha
Helix 11
AB2
A
171 186Right-handed alpha
Helix 12
AB3
A
187 198Right-handed alpha
Helix 13
AB4
A
202 216Right-handed alpha
Helix 14
AB5
A
218 232Right-handed alpha
Helix 15
AB6
A
239 252Right-handed alpha
Helix 16
AB7
A
253 267Right-handed alpha
Helix 17
AB8
A
272 286Right-handed alpha
Helix 18
AB9
A
288 299Right-handed alpha
Helix 19
AC1
A
303 317Right-handed alpha
Helix 20
AC2
A
319 333Right-handed alpha
Helix 21
AC3
A
338 353Right-handed alpha
Helix 22
AC4
A
354 369Right-handed alpha
Helix 23
AC5
A
374 388Right-handed alpha
Helix 24
AC6
A
390 400Right-handed alpha
Helix 25
AC7
A
406 421Right-handed alpha
Helix 26
AC8
A
422 437Right-handed alpha
Helix 27
AC9
A
441 454Right-handed alpha
Helix 28
AD1
A
456 470Right-handed alpha
Helix 29
AD2
A
499 517Right-handed alpha
Helix 30
AD3
A
531 541Right-handed alpha
Helix 31
AD4
A
542 555Right-handed alpha
Helix 32
AD5
A
570 585Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9KFY.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 490first strand
Strand 2
A
479 483anti-parallel
Strand 3
A
561 565anti-parallel
Strand 4
A
588 591parallel
Strand 5
A
596 600anti-parallel
Strand 6
A
603 604anti-parallel
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